Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC006026.1-201ENST00000444025 1803 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 ZNF680P1-201ENST00000436625 1469 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 AP001273.1-201ENST00000624493 3152 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 RNU6-115P-201ENST00000364310 107 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 Y_RNA.409-201ENST00000383990 98 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 Y_RNA.535-201ENST00000384612 99 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 U8.14-201ENST00000390843 143 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 SNORA48.2-201ENST00000390926 124 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 GSTM3P2-201ENST00000412746 530 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 PRELID3BP11-201ENST00000414230 479 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 NUP35P2-201ENST00000416748 943 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 AL953862.1-201ENST00000423016 168 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 PGBD4P3-201ENST00000440731 581 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 USP9YP12-201ENST00000450481 570 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 NDUFA5P7-201ENST00000452914 242 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 RBM43P1-201ENST00000476891 1081 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 RPS29P2-201ENST00000479278 136 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 PPBPP1-201ENST00000510807 373 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 RN7SKP18-201ENST00000516005 275 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 RNA5SP208-201ENST00000516156 78 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 SCARNA15.1-201ENST00000516384 125 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 MTCO2P4-201ENST00000517968 247 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 DEFB131D-201ENST00000526803 184 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.76□□□□□ -1.65
SYNE4Q8N205 BNIP3P8-201ENST00000597863 560 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 AC128687.2-201ENST00000609657 566 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 AC126177.8-201ENST00000618339 1015 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 LRRC77P-213ENST00000637727 880 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 AC010329.2-201ENST00000595195 2737 ntBASIC4.76□□□□□ -1.65
SYNE4Q8N205 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNE4Q8N205 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 Y_RNA.89-201ENST00000363031 102 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 RNU6-777P-201ENST00000364265 104 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 Y_RNA.296-201ENST00000364930 108 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 Y_RNA.402-201ENST00000383972 102 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 PRRC2CP1-201ENST00000404428 159 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 RNU6-195P-201ENST00000411352 109 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 C1DP2-201ENST00000418167 426 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC010881.1-201ENST00000433830 235 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 SLC31A1P1-201ENST00000451221 567 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AP001486.1-201ENST00000463339 476 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC006511.1-201ENST00000470614 315 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL049873.1-201ENST00000480540 376 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC079382.1-201ENST00000493346 557 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 HMGN1P12-201ENST00000499125 195 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 HSPD1P15-201ENST00000505573 1122 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 RN7SKP13-201ENST00000515933 244 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC123904.3-201ENST00000547218 814 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC137800.2-201ENST00000574375 120 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC009977.1-201ENST00000586015 570 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL035413.2-201ENST00000604801 525 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 SNORA62.6-201ENST00000606322 83 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL020991.1-201ENST00000612314 373 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL592295.2-201ENST00000612578 206 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.75□□□□□ -1.65
SYNE4Q8N205 AL139089.1-201ENST00000620372 975 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC009033.1-201ENST00000624279 431 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC026634.1-201ENST00000634369 198 ntBASIC4.75□□□□□ -1.65
SYNE4Q8N205 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms