Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL590139.1-201ENST00000416267 400 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 MTND2P23-201ENST00000422990 651 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL359265.2-201ENST00000434367 631 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC005154.2-201ENST00000438110 379 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 NIPA2P5-201ENST00000452282 464 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL738P-201ENST00000470264 297 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC096576.1-201ENST00000489014 359 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RNA5SP464-201ENST00000516251 108 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-64P-201ENST00000517119 105 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 MYL12AP1-201ENST00000518490 515 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 FAM60DP-201ENST00000524174 632 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 BNIP3P22-201ENST00000593399 556 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC006329.2-201ENST00000611491 394 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM48Q8IWZ4 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 TAB3P1-202ENST00000452645 1634 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AL590240.1-201ENST00000334118 313 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-188P-201ENST00000364207 107 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RNU1-82P-201ENST00000390851 165 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RNU11-4P-201ENST00000391149 133 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC114491.1-201ENST00000416095 246 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC119751.6-201ENST00000416712 186 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 CYCSP10-201ENST00000417973 294 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC068533.1-201ENST00000418542 415 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 BTF3L4P3-201ENST00000418879 476 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 HSPE1P1-201ENST00000421494 318 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RPL12P34-201ENST00000424532 479 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 HMGB3P11-201ENST00000440127 604 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AL356981.1-201ENST00000454879 684 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AP006289.1-201ENST00000538089 277 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC008638.3-201ENST00000603341 463 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AL360085.1-201ENST00000604713 532 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 ZNF734P-201ENST00000419494 1534 ntBASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM48Q8IWZ4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM48Q8IWZ4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM48Q8IWZ4 AC073343.1-201ENST00000328239 651 ntBASIC4.65□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.387-201ENST00000383918 102 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms