Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RPL9P32-201ENST00000464118 620 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RN7SL809P-201ENST00000482040 297 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AP002812.1-201ENST00000495378 474 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC040926.1-201ENST00000530195 238 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 LSM6P2-201ENST00000552208 177 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC084783.1-201ENST00000565846 910 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RN7SL708P-201ENST00000580952 299 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 PRPF19P1-201ENST00000584766 898 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC008814.1-201ENST00000603797 406 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC009779.6-201ENST00000603972 165 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 RAC1P9-201ENST00000604990 392 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 U6.104-201ENST00000637979 90 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 TPTE2P4-201ENST00000258589 1605 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AC097714.1-201ENST00000511272 1647 ntBASIC4.79□□□□□ -1.64
ATG4DQ86TL0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4DQ86TL0 TRIM51GP-201ENST00000534741 1350 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 SAMMSON-213ENST00000641336 1521 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AL049555.1-201ENST00000562834 1933 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 THAP12P4-201ENST00000528321 2266 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 CASC19-284ENST00000642142 1868 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 U3.2-201ENST00000362981 210 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RNA5SP240-201ENST00000365355 128 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RNA5SP187-201ENST00000384400 119 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RNU6-95P-201ENST00000384697 107 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 MIR105-1-201ENST00000385222 81 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RNU6-550P-201ENST00000391057 101 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RPL30P2-201ENST00000414021 291 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 GNG5P5-201ENST00000420444 220 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 SNORD5.1-201ENST00000458800 75 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC005532.2-201ENST00000467154 373 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC006427.1-201ENST00000514359 712 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 RNU6-941P-201ENST00000516346 108 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.700-201ENST00000516806 100 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC022884.2-201ENST00000578535 580 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 MIR548AI-201ENST00000579940 88 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 COX6CP3-201ENST00000580869 223 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 MIR5188-201ENST00000583467 113 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 MIR4443-201ENST00000585052 53 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC023813.4-201ENST00000607580 580 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AL136313.1-201ENST00000624804 202 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC074101.1-201ENST00000637861 241 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AC022031.1-201ENST00000585985 2593 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 AL022311.1-201ENST00000623726 19416 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4DQ86TL0 BDP1P-201ENST00000582658 1990 ntBASIC4.78□□□□□ -1.64
ATG4DQ86TL0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
ATG4DQ86TL0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SMG1P7-201ENST00000565246 2704 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.19-201ENST00000362462 99 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RNA5SP258-201ENST00000362750 119 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 RNU6-280P-201ENST00000364145 104 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 SNORA58B-201ENST00000364259 136 ntBASIC4.77□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.274-201ENST00000364714 101 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms