Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.71□□□□□ -1.65
UBE3BQ7Z3V4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
UBE3BQ7Z3V4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-289P-201ENST00000364093 107 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-809P-201ENST00000384461 107 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 CIR1P3-201ENST00000405137 479 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC093578.1-201ENST00000415219 368 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 C1DP2-201ENST00000418167 426 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 NEK4P1-201ENST00000433383 879 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC073614.1-201ENST00000438690 650 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 TRBV26-201ENST00000456572 344 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC005726.1-201ENST00000494679 427 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC112204.1-201ENST00000502591 103 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 HMGN1P11-201ENST00000508668 303 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC104619.4-201ENST00000510773 249 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-718P-201ENST00000516166 105 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 SNORA18.6-201ENST00000516792 115 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-1003P-201ENST00000517099 105 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AF186190.1-201ENST00000517470 480 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AP003467.2-201ENST00000520175 319 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 PDCD5P1-201ENST00000543528 309 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RPS3AP4-201ENST00000555161 764 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC080013.4-201ENST00000607624 649 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC090970.3-201ENST00000612566 866 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL445264.1-201ENST00000621719 171 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC124864.2-201ENST00000624736 186 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AC009093.8-201ENST00000641769 292 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 AL161912.2-201ENST00000565707 3007 ntBASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3BQ7Z3V4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 IPO8P1-201ENST00000455509 3109 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-867P-201ENST00000364956 107 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC007742.1-201ENST00000425789 329 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AL138785.1-201ENST00000425821 331 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC000111.3-201ENST00000433478 193 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 ELOCP26-201ENST00000436067 329 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 RPL23AP74-201ENST00000437246 471 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 PSPHP1-201ENST00000450062 261 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 USP9YP34-201ENST00000453983 808 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 Z82190.1-201ENST00000454534 490 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC087879.1-201ENST00000474343 374 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 FAM172BP-201ENST00000487497 1089 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 FTH1P24-201ENST00000503502 462 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC108078.1-201ENST00000508073 725 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-314P-201ENST00000516574 104 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 RPL21P5-201ENST00000554662 472 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 HMGB3P26-201ENST00000560051 582 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AP005205.1-201ENST00000563503 508 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC137800.2-201ENST00000574375 120 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 NF1P5-201ENST00000588287 448 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC068790.5-201ENST00000602741 355 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AL137849.1-201ENST00000604767 169 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AL592295.2-201ENST00000612578 206 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AC072046.2-201ENST00000618366 268 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 AL157786.1-207ENST00000627771 695 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 MTND5P28-201ENST00000438005 1594 ntBASIC4.7□□□□□ -1.66
UBE3BQ7Z3V4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 SAGE4P-201ENST00000442271 3381 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 FARSBP1-201ENST00000435808 1778 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC009961.2-201ENST00000435771 251 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms