Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCHD4Q6ZW05 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCHD4Q6ZW05 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCHD4Q6ZW05 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
PTCHD4Q6ZW05 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RNY1P12-201ENST00000364251 105 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RNU6-169P-201ENST00000365336 107 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 MIR19A-201ENST00000384878 82 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RPL7P60-201ENST00000397636 735 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RNA5SP56-201ENST00000410277 118 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RNU2-47P-201ENST00000410649 186 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 CCDC58P2-201ENST00000417131 366 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AL109913.1-201ENST00000421173 514 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 CHIAP3-201ENST00000423668 1133 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 TIMM9P1-201ENST00000436122 256 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RPL23AP43-201ENST00000446445 471 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RPL23AP20-201ENST00000447965 421 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 DPPA3P1-201ENST00000448050 469 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 TPT1P13-201ENST00000449760 499 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RPS27AP17-201ENST00000463344 455 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 MTCO2P29-201ENST00000465212 189 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RPL23AP2-201ENST00000471227 466 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AP001086.1-201ENST00000494882 321 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC104164.2-201ENST00000496953 495 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC021146.1-201ENST00000511202 716 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RN7SKP116-201ENST00000516902 319 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 MTND1P35-201ENST00000526739 508 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 SETP7-201ENST00000552169 453 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AL121579.1-201ENST00000555129 305 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AL669831.4-202ENST00000590817 238 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 KC877982.1-201ENST00000602313 470 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 MIR1321-201ENST00000637766 79 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 AC138915.3-201ENST00000562908 1389 ntBASIC4□□□□□ -1.77
PTCHD4Q6ZW05 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PTCHD4Q6ZW05 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 Y_RNA.89-201ENST00000363031 102 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RNU6-534P-201ENST00000364877 106 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 Y_RNA.295-201ENST00000364918 102 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 Y_RNA.573-201ENST00000384763 105 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 MIR105-2-201ENST00000385083 81 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RNU6-821P-201ENST00000390995 107 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 MIR1183-201ENST00000408856 89 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RN7SKP106-201ENST00000410832 272 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 JKAMPP1-201ENST00000413804 919 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RBMY1KP-201ENST00000423480 476 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RPS27AP12-201ENST00000429552 465 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 TPT1P14-201ENST00000448018 505 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AL451050.1-201ENST00000450126 415 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 HMGN2P7-201ENST00000456186 273 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 HMGB1P25-201ENST00000468402 607 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 ST13P14-201ENST00000474095 734 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 RPL12P20-201ENST00000475538 479 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC068305.1-201ENST00000497406 726 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC008638.1-201ENST00000506035 866 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 NDUFB4P9-201ENST00000511646 388 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AP003385.6-201ENST00000531603 374 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AL512310.1-201ENST00000548639 172 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 MIR4436B2-201ENST00000581415 91 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 MIR4436B1-201ENST00000583272 91 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC011451.2-201ENST00000604303 598 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 AC008536.2-201ENST00000607284 349 ntBASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCHD4Q6ZW05 uc_338.12-201ENST00000616344 181 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms