Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AP001273.1-201ENST00000624493 3152 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.460-201ENST00000384255 102 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 MT-TC-201ENST00000387405 66 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 snosnR66.1-201ENST00000391095 99 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AL162578.1-201ENST00000406202 378 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 ELOCP19-201ENST00000411919 318 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AL591848.1-201ENST00000413092 322 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 RPL17P36-201ENST00000420302 549 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 RPL35AP12-201ENST00000425362 338 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 OR4K11P-201ENST00000431829 904 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC092162.1-201ENST00000432828 434 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 RPL36AP6-201ENST00000435770 321 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC016696.1-201ENST00000446949 318 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 RPS17P13-201ENST00000448974 407 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC073415.1-201ENST00000449240 153 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 HMGB3P21-201ENST00000452483 547 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC068305.1-201ENST00000497406 726 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AP001781.1-201ENST00000530977 207 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC005868.1-201ENST00000536421 331 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC128657.1-201ENST00000549459 145 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AL442663.2-201ENST00000554385 511 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AL133153.1-201ENST00000557756 303 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 OR4K8P-201ENST00000578842 1048 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC006329.2-201ENST00000611491 394 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 uc_338.11-201ENST00000619132 160 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC100810.6-201ENST00000638068 285 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 SAMMSON-213ENST00000641336 1521 ntBASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RUFY4Q6ZNE9 AC004972.1-201ENST00000623934 2209 ntBASIC5.21□□□□□ -1.57
RUFY4Q6ZNE9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.57
RUFY4Q6ZNE9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RUFY4Q6ZNE9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.21□□□□□ -1.57
RUFY4Q6ZNE9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.21□□□□□ -1.57
RUFY4Q6ZNE9 AC006026.1-201ENST00000444025 1803 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-39P-201ENST00000384344 107 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AL356432.1-201ENST00000405809 419 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 RNU6-193P-201ENST00000410977 107 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 CKS1BP6-201ENST00000424932 240 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 OR2AS1P-201ENST00000427827 319 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 PSMA2P3-201ENST00000429685 675 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 ELOCP18-201ENST00000434209 337 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AL451139.1-201ENST00000434718 346 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 TAAR7P-201ENST00000436141 242 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 MTND6P18-201ENST00000439477 513 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC103987.1-201ENST00000473394 348 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 RPS3AP50-201ENST00000487064 803 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 EIF4EP3-201ENST00000498782 656 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC091885.1-201ENST00000506658 268 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC017037.2-201ENST00000513850 890 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 SNORA19.2-201ENST00000516013 114 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 HMGB1P19-201ENST00000517578 577 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 HMGN1P28-201ENST00000521340 364 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 SUB1P1-201ENST00000524415 382 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC011611.1-201ENST00000552179 197 ntBASIC5.21□□□□□ -1.58
RUFY4Q6ZNE9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms