Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARL4AP2-201ENST00000507378 601 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MTND5P4-201ENST00000514978 288 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AL121576.1-201ENST00000556055 276 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MTND4P33-201ENST00000556706 766 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 ACTR3BP3-201ENST00000565577 979 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MIR5684-201ENST00000585074 65 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 TPMTP1-201ENST00000592307 737 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC092953.2-201ENST00000608000 699 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC073308.1-201ENST00000623696 305 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AL356596.1-201ENST00000624230 379 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC079597.1-201ENST00000624306 508 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 API5P2-201ENST00000397055 1498 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC092447.10-201ENST00000620607 1652 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC116667.1-201ENST00000604855 2072 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RN7SKP280-201ENST00000364196 304 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 SNORA48.7-201ENST00000391302 135 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 TPT1P2-201ENST00000413105 503 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 SPA17P1-201ENST00000416656 452 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RPL23AP82-202ENST00000427528 469 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RPL7P2-201ENST00000427639 268 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL390023.1-201ENST00000428836 262 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL117339.2-201ENST00000430475 180 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL035246.1-201ENST00000433554 1255 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 TAAR7P-201ENST00000436141 242 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC006011.1-201ENST00000442758 349 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 DDX3P2-201ENST00000446138 111 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 MTND4LP3-201ENST00000468320 276 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RPL7P24-201ENST00000493052 752 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AP002812.1-201ENST00000495378 474 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC104090.1-201ENST00000506341 1171 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC026402.1-201ENST00000513642 170 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 SUMO2P20-201ENST00000520803 283 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC004024.1-201ENST00000549244 247 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RPL23AP84-201ENST00000571193 464 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC005951.2-201ENST00000576282 495 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RN7SL600P-201ENST00000581811 299 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC011458.1-201ENST00000604034 617 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL450336.1-201ENST00000605180 586 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL139344.1-201ENST00000605228 195 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AL592221.1-201ENST00000605266 382 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AC112220.3-201ENST00000605502 502 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 AP001002.2-201ENST00000625137 386 ntBASIC3.31□□□□□ -1.88
C11orf88Q6PI97 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C11orf88Q6PI97 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RIOK3P1-201ENST00000418778 1528 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 ZNF876P-202ENST00000398732 1485 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RNU6-198P-201ENST00000384258 104 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 MIR554-201ENST00000384874 96 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 U3.20-201ENST00000390909 217 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms