Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU1-13P-201ENST00000384499 162 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 TPMTP2-201ENST00000414372 726 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC008280.1-201ENST00000418851 412 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 RPS3AP52-201ENST00000435639 297 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC104651.2-201ENST00000447549 528 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 CCDC34P1-201ENST00000507441 517 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-714P-201ENST00000516963 103 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 COX6CP8-201ENST00000522620 226 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 COPS8P3-201ENST00000526024 482 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC005868.1-201ENST00000536421 331 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AL163153.1-201ENST00000554223 283 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC034105.4-201ENST00000568304 277 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 RN7SL176P-201ENST00000580352 264 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AL591034.3-201ENST00000605511 685 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 MIR92B-201ENST00000607575 96 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 OR10AB1P-201ENST00000609613 938 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC079597.1-201ENST00000624306 508 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AL359757.2-201ENST00000624309 274 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC008785.1-201ENST00000624475 456 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC109446.4-201ENST00000623235 2755 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC092447.10-201ENST00000620607 1652 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 AC004817.4-201ENST00000602396 3625 ntBASIC4.95□□□□□ -1.62
CNKSR3Q6P9H4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC007529.1-201ENST00000418574 2178 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-343P-201ENST00000364709 104 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.452-201ENST00000384202 108 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNY4P36-201ENST00000391116 96 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 DSTNP4-201ENST00000399472 474 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL583835.1-201ENST00000399570 407 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL022722.2-201ENST00000402519 180 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL592114.1-201ENST00000403842 483 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNA5SP317-201ENST00000410176 116 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNA5SP311-201ENST00000411290 116 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC127526.1-201ENST00000417526 366 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 HSPE1P1-201ENST00000421494 318 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RGS17P1-201ENST00000423358 553 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 VTI1BP4-201ENST00000427516 527 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 HSFY6P-201ENST00000445573 403 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 ISCUP1-201ENST00000454451 448 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNU7-152P-201ENST00000458982 64 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC053481.1-201ENST00000467217 306 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 VN1R17P-201ENST00000472048 1090 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 PTP4A1P4-201ENST00000512479 322 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC114797.1-201ENST00000514003 728 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNA5SP315-201ENST00000516340 116 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RNA5SP312-201ENST00000517068 116 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 NARSP2-201ENST00000518524 679 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC107934.1-201ENST00000522215 217 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL117187.1-201ENST00000555482 181 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 MIR5186-201ENST00000577504 120 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 MIR4512-201ENST00000583257 77 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL669831.4-202ENST00000590817 238 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AP001330.4-201ENST00000604350 154 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 uc_338.22-201ENST00000622722 187 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 AL049780.3-201ENST00000624612 1583 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms