Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SKINT1L-201ENST00000401057 817 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 BX842559.1-201ENST00000419615 532 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 MTND1P32-201ENST00000433043 938 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 Z73417.1-201ENST00000447373 778 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 HMGB1P36-201ENST00000487709 576 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 CBX3P3-201ENST00000508108 532 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC010265.1-201ENST00000513509 211 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 RNU1-61P-201ENST00000516107 151 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AL590099.1-201ENST00000615276 138 ntBASIC3.4□□□□□ -1.87
CASC4Q6P4E1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CASC4Q6P4E1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU4-35P-201ENST00000362588 141 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU6-289P-201ENST00000364093 107 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU6-173P-201ENST00000364215 104 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 SNORA4.1-201ENST00000364263 144 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU6-777P-201ENST00000364265 104 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNA5SP31-201ENST00000411144 127 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 TXNL1P1-201ENST00000429528 554 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 ATP5JP1-201ENST00000431631 322 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 HMGB3P11-201ENST00000440127 604 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 snoU13.8-201ENST00000458890 104 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC017015.1-201ENST00000477387 286 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 RNU6-714P-201ENST00000516963 103 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC008507.1-201ENST00000587506 734 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL596327.1-201ENST00000603629 213 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC106028.5-201ENST00000610332 395 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 VIS1.1-201ENST00000610517 203 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL139418.1-201ENST00000613613 177 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL136981.2-201ENST00000617319 734 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 CR392039.5-201ENST00000623201 510 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC079228.1-201ENST00000624774 1049 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL034408.1-202ENST00000636088 415 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC009093.8-201ENST00000641769 292 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 TAB3P1-202ENST00000452645 1634 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.39□□□□□ -1.87
CASC4Q6P4E1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CASC4Q6P4E1 AC009812.4-201ENST00000569134 1805 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 SNORA62.3-201ENST00000365110 153 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 MIR218-2-201ENST00000385006 110 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 SNORD17-201ENST00000390930 237 ntBASIC3.38□□□□□ -1.87
CASC4Q6P4E1 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms