Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OR2AH1P-201ENST00000425717 928 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL451139.1-201ENST00000434718 346 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 RPS26P40-201ENST00000435209 294 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC114495.1-201ENST00000441274 436 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 BTF3P6-201ENST00000448054 499 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 HMGN3P1-201ENST00000453847 193 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 MTCO3P2-201ENST00000457365 171 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 GZMAP1-201ENST00000503054 631 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 SLC25A15P5-201ENST00000508033 253 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC116655.1-201ENST00000508324 901 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC012400.1-201ENST00000518452 381 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC023157.2-201ENST00000540596 141 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 GNAI2P1-201ENST00000541815 315 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 RRN3P3-201ENST00000549207 578 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC234771.5-201ENST00000600161 514 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 MIR8062-201ENST00000621515 85 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC112198.2-201ENST00000426589 6996 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 THAP12P4-201ENST00000528321 2266 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL031595.2-201ENST00000624215 19071 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 RN7SKP153-201ENST00000365026 316 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 Y_RNA.493-201ENST00000384422 102 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 MIR589-201ENST00000385238 99 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 RNU4-25P-201ENST00000410569 230 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL590139.1-201ENST00000416267 400 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC234781.4-201ENST00000419384 244 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 TIMM9P1-201ENST00000436122 256 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 RPL7P28-201ENST00000437739 740 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC005297.2-201ENST00000450430 606 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC004801.2-202ENST00000463559 283 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL591473.1-201ENST00000464297 313 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC116562.3-201ENST00000506136 177 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 RNA5SP503-201ENST00000517047 117 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC068587.5-201ENST00000528506 175 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC011626.1-201ENST00000604710 562 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL008729.2-201ENST00000606393 473 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AL355365.1-201ENST00000616480 294 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 PISRT1.1-201ENST00000616930 107 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC015914.2-201ENST00000618167 288 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
RNF43Q68DV7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF43Q68DV7 AC091812.1-201ENST00000432235 1948 ntBASIC5.34□□□□□ -1.55
RNF43Q68DV7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF43Q68DV7 SMG1P4-204ENST00000523028 4131 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 ZNF734P-201ENST00000419494 1534 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 CDC27P2-201ENST00000425026 1922 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 SNORD3E-201ENST00000362899 217 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-593P-201ENST00000364716 112 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 Y_RNA.350-201ENST00000365409 98 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RHOT1P2-201ENST00000366423 333 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-472P-201ENST00000384299 107 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-823P-201ENST00000391042 103 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 SNORA75.6-201ENST00000391318 127 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 AC016769.3-201ENST00000396562 315 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RN7SKP235-201ENST00000410662 305 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms