Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC104472.2-201ENST00000469035 601 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RN7SL809P-201ENST00000482040 297 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC020893.1-201ENST00000502452 580 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 SNORA40.14-201ENST00000516543 86 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU5B-3P-201ENST00000516601 115 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-1212P-201ENST00000517023 104 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RN7SL690P-201ENST00000582087 240 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC025034.2-201ENST00000623264 286 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC009902.3-201ENST00000606235 2172 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RC3H1Q5TC82 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
RC3H1Q5TC82 AC093671.1-201ENST00000624981 2929 ntBASIC6.46□□□□□ -1.37
RC3H1Q5TC82 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
RC3H1Q5TC82 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.126-201ENST00000363382 111 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 SNORD27-201ENST00000363981 72 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.506-201ENST00000384494 102 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 MIR589-201ENST00000385238 99 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 RNA5SP332-201ENST00000391063 115 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AF186996.5-201ENST00000418098 904 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC093414.1-201ENST00000434712 514 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 FTH1P1-201ENST00000437933 532 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 CBX1P4-201ENST00000439415 457 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 NEFMP1-201ENST00000443423 1006 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 RPL21P89-201ENST00000444021 467 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 SCARNA18-201ENST00000459004 134 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 RN7SL443P-201ENST00000464331 290 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 RPL7AP10-201ENST00000481016 791 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AL138825.1-201ENST00000618587 192 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC097063.1-201ENST00000426714 1797 ntBASIC6.46□□□□□ -1.38
RC3H1Q5TC82 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RC3H1Q5TC82 AC125336.1-201ENST00000508893 2827 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 SAMMSON-226ENST00000642089 1582 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.19-201ENST00000362462 99 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.274-201ENST00000364714 101 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.539-201ENST00000384635 107 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 MIR548H3-201ENST00000408771 118 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 UBE2V1P13-201ENST00000436983 439 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 AC093852.1-201ENST00000503587 266 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 SUB1P3-201ENST00000564581 315 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 MIR5692C1-201ENST00000585309 91 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 MIR4272-201ENST00000635924 64 ntBASIC6.45□□□□□ -1.38
RC3H1Q5TC82 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RC3H1Q5TC82 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 TPTE2P4-201ENST00000258589 1605 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 AC097714.1-201ENST00000511272 1647 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 AC004158.1-201ENST00000564508 4319 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 RNU6-212P-201ENST00000362642 104 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 RNU6-97P-201ENST00000363387 104 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.314-201ENST00000365114 102 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RC3H1Q5TC82 RNU6-1081P-201ENST00000384537 107 ntBASIC6.44□□□□□ -1.38
RC3H1Q5TC82 Y_RNA.551-201ENST00000384661 102 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms