Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC007685.1-201ENST00000329806 452 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 FGF7P2-201ENST00000332473 296 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AL161781.1-201ENST00000354277 403 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 U3.15-201ENST00000365398 212 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 MIR7-3-201ENST00000384898 110 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 RPL21P17-201ENST00000397467 475 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 SNORA3.3-201ENST00000408712 125 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 RN7SKP266-201ENST00000410232 287 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC007742.1-201ENST00000425789 329 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 ELOCP26-201ENST00000436067 329 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 SSXP1-201ENST00000453640 473 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 SNRPGP5-201ENST00000456003 220 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 snoU13.8-201ENST00000458890 104 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC068305.1-201ENST00000497406 726 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC022447.3-201ENST00000506865 495 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 RNU6-27P-201ENST00000516146 107 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC025881.1-201ENST00000518851 512 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AP003392.2-201ENST00000527269 208 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC107016.1-201ENST00000550463 337 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 MTCO3P24-201ENST00000572729 782 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC090615.1-201ENST00000577519 154 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC112187.2-201ENST00000604345 283 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC007684.1-201ENST00000609671 477 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC005344.1-201ENST00000613391 459 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC027807.2-201ENST00000616099 408 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AC093591.3-201ENST00000634516 308 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 AL034408.1-202ENST00000636088 415 ntBASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM71Q2Q1W2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM71Q2Q1W2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.34□□□□□ -1.72
TRIM71Q2Q1W2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC004520.1-201ENST00000608362 1413 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 RNU5F-6P-201ENST00000362979 116 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 SNORD74.4-201ENST00000364129 80 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MIR1305-201ENST00000408300 86 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 RPS23P10-201ENST00000416185 486 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MTCYBP45-201ENST00000435243 565 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 CYCSP43-201ENST00000438233 310 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 RPS26P28-201ENST00000470806 348 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 RPL7P49-201ENST00000471402 708 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 HMGB1P36-201ENST00000487709 576 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC008694.2-201ENST00000517591 306 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 MTND4LP18-201ENST00000526864 291 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC022968.1-201ENST00000567372 442 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AL669831.4-202ENST00000590817 238 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AP000403.1-201ENST00000603349 851 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AL161756.2-201ENST00000604597 246 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC095031.1-201ENST00000623685 672 ntBASIC4.33□□□□□ -1.72
TRIM71Q2Q1W2 AC091925.2-201ENST00000625059 256 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms