Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN3Q15651 SET-203ENST00000372688 801 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGN3Q15651 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HMGN3Q15651 AL445529.1-201ENST00000398713 389 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 AL024474.1-201ENST00000404655 591 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN3Q15651 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 ZNF90P2-204ENST00000419323 1075 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 RPL7P37-201ENST00000425095 738 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN3Q15651 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.71□□□□□ -2.14
HMGN3Q15651 USP9YP8-201ENST00000441913 500 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN3Q15651 MTCO3P11-201ENST00000455103 774 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN3Q15651 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN3Q15651 RAC1P5-201ENST00000512182 576 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 AC103783.1-201ENST00000520506 373 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN3Q15651 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGN3Q15651 AL512310.1-201ENST00000548639 172 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN3Q15651 AC009063.1-201ENST00000563342 702 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 MIR4672-201ENST00000583126 81 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 AC103881.1-201ENST00000603476 538 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 MIR6873-201ENST00000622788 63 ntBASIC1.71□□□□□ -2.14
HMGN3Q15651 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMGN3Q15651 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMGN3Q15651 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN3Q15651 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN3Q15651 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMGN3Q15651 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMGN3Q15651 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMGN3Q15651 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 CBWD4P-201ENST00000445695 655 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 AC128713.1-201ENST00000471495 306 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 OR5H5P-201ENST00000503164 928 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN3Q15651 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN3Q15651 AC104090.1-201ENST00000506341 1171 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN3Q15651 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN3Q15651 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN3Q15651 AC245036.5-201ENST00000596330 847 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 AC069304.3-201ENST00000603938 1084 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 AC120053.1-201ENST00000607706 736 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 AL355816.1-201ENST00000607951 118 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 CR589904.2-201ENST00000612533 440 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN3Q15651 AC010378.1-201ENST00000619270 362 ntBASIC1.7□□□□□ -2.14
HMGN3Q15651 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGN3Q15651 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
HMGN3Q15651 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGN3Q15651 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN3Q15651 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.69□□□□□ -2.14
HMGN3Q15651 RNU6-335P-201ENST00000364563 113 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 XGY1-201ENST00000381172 446 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 Y_RNA.510-201ENST00000384511 114 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGN3Q15651 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGN3Q15651 AL356320.1-201ENST00000429616 163 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 ELOCP11-201ENST00000436690 332 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 RPL23AP33-201ENST00000442301 452 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.69□□□□□ -2.14
HMGN3Q15651 ELOCP16-201ENST00000444494 332 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AL136380.1-201ENST00000447970 162 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.69□□□□□ -2.14
HMGN3Q15651 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN3Q15651 RN7SKP283-201ENST00000517197 270 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN3Q15651 CENPUP2-201ENST00000555897 1186 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AC106734.1-201ENST00000568646 663 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.69□□□□□ -2.14
HMGN3Q15651 AC090616.5-202ENST00000582111 297 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 VN1R81P-201ENST00000602085 372 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AC104307.1-201ENST00000616142 196 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGN3Q15651 AL356266.1-201ENST00000623311 483 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN3Q15651 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN3Q15651 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN3Q15651 MTND4P35-201ENST00000604257 1375 ntBASIC1.69□□□□□ -2.14
HMGN3Q15651 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
HMGN3Q15651 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN3Q15651 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AP001350.1-201ENST00000601906 1524 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.68□□□□□ -2.14
HMGN3Q15651 SDCBPP1-201ENST00000440192 890 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 NPM1P13-201ENST00000452663 865 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC078857.1-201ENST00000469870 667 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AC087879.1-201ENST00000474343 374 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AC093281.2-201ENST00000510153 597 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms