Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH13P55290 SNORA31.8-201ENST00000516327 108 ntBASIC3.51□□□□□ -1.85
CDH13P55290 RN7SKP289-201ENST00000517244 295 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC007991.1-201ENST00000522680 631 ntBASIC3.51□□□□□ -1.85
CDH13P55290 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH13P55290 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH13P55290 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH13P55290 OR4K8P-201ENST00000578842 1048 ntBASIC3.51□□□□□ -1.85
CDH13P55290 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
CDH13P55290 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH13P55290 BNIP3P23-201ENST00000599655 511 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC068313.1-201ENST00000604028 1008 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC012443.1-201ENST00000605605 231 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC122133.1-201ENST00000613964 233 ntBASIC3.51□□□□□ -1.85
CDH13P55290 AC092628.2-201ENST00000622492 339 ntBASIC3.51□□□□□ -1.85
CDH13P55290 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH13P55290 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH13P55290 AC006927.3-201ENST00000638789 384 ntBASIC3.51□□□□□ -1.85
CDH13P55290 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CDH13P55290 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.51□□□□□ -1.85
CDH13P55290 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH13P55290 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH13P55290 AL672296.1-201ENST00000427780 2158 ntBASIC3.51□□□□□ -1.85
CDH13P55290 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDH13P55290 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 MTCO1P9-201ENST00000505577 1534 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC068647.1-201ENST00000489539 2265 ntBASIC3.5□□□□□ -1.85
CDH13P55290 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH13P55290 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
CDH13P55290 RNU6-553P-201ENST00000364047 96 ntBASIC3.5□□□□□ -1.85
CDH13P55290 RN7SKP227-201ENST00000364445 330 ntBASIC3.5□□□□□ -1.85
CDH13P55290 RNU6-769P-201ENST00000384407 104 ntBASIC3.5□□□□□ -1.85
CDH13P55290 RPL32P23-201ENST00000397237 405 ntBASIC3.5□□□□□ -1.85
CDH13P55290 MTND1P21-201ENST00000412991 285 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC079780.1-201ENST00000428259 207 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AL158071.1-201ENST00000430315 461 ntBASIC3.5□□□□□ -1.85
CDH13P55290 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 AL831737.1-201ENST00000441288 271 ntBASIC3.5□□□□□ -1.85
CDH13P55290 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 RPL23AP31-201ENST00000456160 467 ntBASIC3.5□□□□□ -1.85
CDH13P55290 HMGN2P16-201ENST00000456802 261 ntBASIC3.5□□□□□ -1.85
CDH13P55290 RN7SL330P-201ENST00000469709 307 ntBASIC3.5□□□□□ -1.85
CDH13P55290 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 AP006245.1-201ENST00000522549 120 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 OR8R1P-201ENST00000543943 764 ntBASIC3.5□□□□□ -1.85
CDH13P55290 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH13P55290 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 AC007224.1-201ENST00000564410 144 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH13P55290 AC034268.2-201ENST00000571784 482 ntBASIC3.5□□□□□ -1.85
CDH13P55290 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
CDH13P55290 MIR544B-201ENST00000582372 78 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.5□□□□□ -1.85
CDH13P55290 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH13P55290 AC025811.1-201ENST00000604312 472 ntBASIC3.5□□□□□ -1.85
CDH13P55290 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH13P55290 BCRP9-201ENST00000605312 388 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC008121.2-201ENST00000614647 523 ntBASIC3.5□□□□□ -1.85
CDH13P55290 MIR7844-201ENST00000616161 122 ntBASIC3.5□□□□□ -1.85
CDH13P55290 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 AC079597.1-201ENST00000624306 508 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC127502.3-201ENST00000636170 1206 ntBASIC3.5□□□□□ -1.85
CDH13P55290 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDH13P55290 AC006378.2-201ENST00000623178 2476 ntBASIC3.5□□□□□ -1.85
CDH13P55290 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
CDH13P55290 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
CDH13P55290 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH13P55290 RNY4P24-201ENST00000362735 96 ntBASIC3.49□□□□□ -1.85
CDH13P55290 RNU6-853P-201ENST00000364306 107 ntBASIC3.49□□□□□ -1.85
CDH13P55290 U3.20-201ENST00000390909 217 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC007066.1-201ENST00000392902 381 ntBASIC3.49□□□□□ -1.85
CDH13P55290 PTMAP5-201ENST00000393073 333 ntBASIC3.49□□□□□ -1.85
CDH13P55290 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
CDH13P55290 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
CDH13P55290 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH13P55290 BX119904.4-201ENST00000424402 301 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AL445669.1-201ENST00000426743 755 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH13P55290 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH13P55290 MRPS31P2-201ENST00000451581 518 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC234775.1-201ENST00000454247 670 ntBASIC3.49□□□□□ -1.85
CDH13P55290 OR6K1P-201ENST00000456766 971 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH13P55290 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH13P55290 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH13P55290 AC068587.1-201ENST00000483613 781 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 OR2A20P-203ENST00000498397 1268 ntBASIC3.49□□□□□ -1.85
CDH13P55290 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms