Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR7151-201ENST00000617477 60 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC091953.2-201ENST00000623979 160 ntBASIC3.71□□□□□ -1.82
CDH12P55289 MIR3653-201ENST00000625572 110 ntBASIC3.71□□□□□ -1.82
CDH12P55289 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH12P55289 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH12P55289 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH12P55289 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 AC008725.1-201ENST00000605123 2263 ntBASIC3.7□□□□□ -1.82
CDH12P55289 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH12P55289 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 OR5J1P-201ENST00000313544 939 ntBASIC3.7□□□□□ -1.82
CDH12P55289 OR4G2P-201ENST00000328113 903 ntBASIC3.7□□□□□ -1.82
CDH12P55289 MIR383-201ENST00000362257 73 ntBASIC3.7□□□□□ -1.82
CDH12P55289 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 Y_RNA.554-201ENST00000384672 102 ntBASIC3.7□□□□□ -1.82
CDH12P55289 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH12P55289 RNU2-47P-201ENST00000410649 186 ntBASIC3.7□□□□□ -1.82
CDH12P55289 RNU4-78P-201ENST00000410940 126 ntBASIC3.7□□□□□ -1.82
CDH12P55289 EIF1P1-201ENST00000421436 341 ntBASIC3.7□□□□□ -1.82
CDH12P55289 CHIAP3-201ENST00000423668 1133 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC006548.1-201ENST00000427470 102 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 RPS4XP4-201ENST00000443195 763 ntBASIC3.7□□□□□ -1.82
CDH12P55289 snoU109.4-201ENST00000458953 143 ntBASIC3.7□□□□□ -1.82
CDH12P55289 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH12P55289 RBM43P1-201ENST00000476891 1081 ntBASIC3.7□□□□□ -1.82
CDH12P55289 S100A11P1-201ENST00000477525 312 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC004924.1-201ENST00000480160 781 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC091167.1-201ENST00000492017 396 ntBASIC3.7□□□□□ -1.82
CDH12P55289 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH12P55289 AC114967.1-201ENST00000504890 259 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH12P55289 AC107934.1-201ENST00000522215 217 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH12P55289 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 AC124947.2-202ENST00000552735 133 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH12P55289 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 AC006960.3-201ENST00000561845 705 ntBASIC3.7□□□□□ -1.82
CDH12P55289 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH12P55289 AL391840.1-201ENST00000571144 367 ntBASIC3.7□□□□□ -1.82
CDH12P55289 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 AC055876.5-201ENST00000605667 259 ntBASIC3.7□□□□□ -1.82
CDH12P55289 BX664608.1-201ENST00000610519 487 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC002550.2-201ENST00000621246 394 ntBASIC3.7□□□□□ -1.82
CDH12P55289 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 CR381572.1-201ENST00000625098 102 ntBASIC3.7□□□□□ -1.82
CDH12P55289 LARP1BP1-201ENST00000506036 1359 ntBASIC3.7□□□□□ -1.82
CDH12P55289 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 AC009902.3-201ENST00000606235 2172 ntBASIC3.7□□□□□ -1.82
CDH12P55289 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH12P55289 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 AC011460.1-201ENST00000636268 1834 ntBASIC3.7□□□□□ -1.82
CDH12P55289 AC090229.1-201ENST00000590983 1609 ntBASIC3.7□□□□□ -1.82
CDH12P55289 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.7□□□□□ -1.82
CDH12P55289 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH12P55289 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH12P55289 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH12P55289 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
CDH12P55289 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH12P55289 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDH12P55289 AC006504.1-201ENST00000562493 3666 ntBASIC3.69□□□□□ -1.82
CDH12P55289 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 AC024560.2-201ENST00000507981 1497 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RN7SKP44-201ENST00000363602 316 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RNU4-1-201ENST00000363925 141 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RNU6-114P-201ENST00000384704 105 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RPL17P50-201ENST00000396131 546 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH12P55289 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH12P55289 MTCYBP5-201ENST00000423752 1135 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RPL31P35-201ENST00000431058 377 ntBASIC3.69□□□□□ -1.82
CDH12P55289 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AC104850.1-201ENST00000435940 476 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AL451074.3-201ENST00000437709 472 ntBASIC3.69□□□□□ -1.82
CDH12P55289 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 MTCO3P20-201ENST00000454926 688 ntBASIC3.69□□□□□ -1.82
CDH12P55289 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 snoU13.3-201ENST00000459441 104 ntBASIC3.69□□□□□ -1.82
CDH12P55289 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 UQCRHP4-201ENST00000471686 272 ntBASIC3.69□□□□□ -1.82
CDH12P55289 RN7SL604P-201ENST00000492589 296 ntBASIC3.69□□□□□ -1.82
CDH12P55289 KCTD9P5-201ENST00000504141 1170 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 MIR2114-201ENST00000516645 80 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 AP000907.2-201ENST00000530827 353 ntBASIC3.69□□□□□ -1.82
CDH12P55289 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms