Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 USP9YP18-201ENST00000425912 695 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AL691449.1-201ENST00000426570 421 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AL139415.2-201ENST00000431968 163 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC009961.2-201ENST00000435771 251 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC005297.2-201ENST00000450430 606 ntBASIC4.22□□□□□ -1.73
COPB1P53618 PABPC1P3-201ENST00000469174 459 ntBASIC4.22□□□□□ -1.73
COPB1P53618 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
COPB1P53618 S100A11P1-201ENST00000477525 312 ntBASIC4.22□□□□□ -1.73
COPB1P53618 MTAPP1-201ENST00000489154 819 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.22□□□□□ -1.73
COPB1P53618 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.22□□□□□ -1.73
COPB1P53618 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.22□□□□□ -1.73
COPB1P53618 RNA5SP208-201ENST00000516156 78 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.22□□□□□ -1.73
COPB1P53618 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COPB1P53618 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.22□□□□□ -1.73
COPB1P53618 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.22□□□□□ -1.73
COPB1P53618 AC006960.3-201ENST00000561845 705 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.22□□□□□ -1.73
COPB1P53618 AC137800.2-201ENST00000574375 120 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.22□□□□□ -1.73
COPB1P53618 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.22□□□□□ -1.73
COPB1P53618 AC091965.4-201ENST00000607691 587 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AL513477.2-201ENST00000607858 568 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC004825.2-201ENST00000616634 455 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC136475.10-201ENST00000620253 385 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.22□□□□□ -1.73
COPB1P53618 AC000123.2-201ENST00000623124 461 ntBASIC4.22□□□□□ -1.73
COPB1P53618 CYP3A51P-201ENST00000633513 256 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC244205.2-202ENST00000635781 342 ntBASIC4.22□□□□□ -1.73
COPB1P53618 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COPB1P53618 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
COPB1P53618 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPB1P53618 AL359837.1-201ENST00000381357 287 ntBASIC4.21□□□□□ -1.74
COPB1P53618 RNU6-146P-201ENST00000384602 108 ntBASIC4.21□□□□□ -1.74
COPB1P53618 MIR181A1-201ENST00000385026 110 ntBASIC4.21□□□□□ -1.74
COPB1P53618 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AC007742.1-201ENST00000425789 329 ntBASIC4.21□□□□□ -1.74
COPB1P53618 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 ELOCP26-201ENST00000436067 329 ntBASIC4.21□□□□□ -1.74
COPB1P53618 SKP1P1-201ENST00000438081 489 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 MTCO3P38-201ENST00000468910 766 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AC012170.1-201ENST00000495139 359 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.21□□□□□ -1.74
COPB1P53618 AC110792.2-201ENST00000510278 224 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC016065.2-201ENST00000514530 444 ntBASIC4.21□□□□□ -1.74
COPB1P53618 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.21□□□□□ -1.74
COPB1P53618 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.21□□□□□ -1.74
COPB1P53618 AC135001.1-201ENST00000544546 283 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.21□□□□□ -1.74
COPB1P53618 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.21□□□□□ -1.74
COPB1P53618 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 AL353997.4-201ENST00000586196 166 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 TPMTP1-201ENST00000592307 737 ntBASIC4.21□□□□□ -1.74
COPB1P53618 VN1R79P-201ENST00000593540 513 ntBASIC4.21□□□□□ -1.74
COPB1P53618 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 AC025946.2-201ENST00000603398 234 ntBASIC4.21□□□□□ -1.74
COPB1P53618 RPL23AP92-201ENST00000603609 255 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.74
COPB1P53618 MIR92B-201ENST00000607575 96 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC091304.9-201ENST00000612091 226 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AC079684.1-201ENST00000621405 437 ntBASIC4.21□□□□□ -1.74
COPB1P53618 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COPB1P53618 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.21□□□□□ -1.74
COPB1P53618 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPB1P53618 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COPB1P53618 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COPB1P53618 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.21□□□□□ -1.74
COPB1P53618 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COPB1P53618 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COPB1P53618 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 U8.3-201ENST00000363321 132 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RN7SKP44-201ENST00000363602 316 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AL022722.2-201ENST00000402519 180 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RPS20P2-201ENST00000402520 389 ntBASIC4.2□□□□□ -1.74
COPB1P53618 NUP35P2-201ENST00000416748 943 ntBASIC4.2□□□□□ -1.74
COPB1P53618 CYP4F29P-201ENST00000420685 446 ntBASIC4.2□□□□□ -1.74
COPB1P53618 MTCO2P5-201ENST00000422621 426 ntBASIC4.2□□□□□ -1.74
COPB1P53618 GLRXP1-201ENST00000423261 334 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AL596276.1-201ENST00000434465 418 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC073614.1-201ENST00000438690 650 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RABEPKP1-201ENST00000440529 1026 ntBASIC4.2□□□□□ -1.74
COPB1P53618 HSPE1P28-201ENST00000443139 211 ntBASIC4.2□□□□□ -1.74
COPB1P53618 HSFY6P-201ENST00000445573 403 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms