Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPL23AP84-201ENST00000571193 464 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AP005136.1-201ENST00000579765 429 ntBASIC4.29□□□□□ -1.72
NEK3P51956 MIR3146-201ENST00000580367 79 ntBASIC4.29□□□□□ -1.72
NEK3P51956 MIR3682-201ENST00000581338 84 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC015726.1-201ENST00000602353 681 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 AC239868.4-201ENST00000608318 671 ntBASIC4.29□□□□□ -1.72
NEK3P51956 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.29□□□□□ -1.72
NEK3P51956 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 TUG1_2.1-201ENST00000614234 87 ntBASIC4.29□□□□□ -1.72
NEK3P51956 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.29□□□□□ -1.72
NEK3P51956 ZYXP1-201ENST00000617638 118 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 MIR492-201ENST00000638676 116 ntBASIC4.29□□□□□ -1.72
NEK3P51956 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NEK3P51956 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NEK3P51956 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NEK3P51956 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEK3P51956 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
NEK3P51956 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NEK3P51956 CCNG1P1-201ENST00000406783 885 ntBASIC4.28□□□□□ -1.72
NEK3P51956 RNU2-8P-201ENST00000410727 190 ntBASIC4.28□□□□□ -1.72
NEK3P51956 RN7SKP182-201ENST00000410772 298 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 COX6B1P7-201ENST00000430845 235 ntBASIC4.28□□□□□ -1.72
NEK3P51956 MTCO2P16-201ENST00000436962 677 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 RPS7P7-201ENST00000463499 571 ntBASIC4.28□□□□□ -1.72
NEK3P51956 FTH1P2-201ENST00000466086 412 ntBASIC4.28□□□□□ -1.72
NEK3P51956 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 HSPE1P6-201ENST00000479457 291 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC068724.1-201ENST00000487100 792 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.28□□□□□ -1.72
NEK3P51956 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 CDC42P4-201ENST00000510507 563 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.28□□□□□ -1.72
NEK3P51956 NDUFB4P9-201ENST00000511646 388 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 DEFB108A-201ENST00000530110 222 ntBASIC4.28□□□□□ -1.72
NEK3P51956 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC006064.5-201ENST00000541782 248 ntBASIC4.28□□□□□ -1.72
NEK3P51956 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.28□□□□□ -1.72
NEK3P51956 AC123904.2-201ENST00000548059 300 ntBASIC4.28□□□□□ -1.72
NEK3P51956 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.28□□□□□ -1.72
NEK3P51956 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.28□□□□□ -1.72
NEK3P51956 MIR3160-1-201ENST00000577972 85 ntBASIC4.28□□□□□ -1.72
NEK3P51956 MIR548AB-201ENST00000584917 84 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AL591034.3-201ENST00000605511 685 ntBASIC4.28□□□□□ -1.72
NEK3P51956 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NEK3P51956 AC024941.1-201ENST00000612250 334 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC013476.2-201ENST00000614456 459 ntBASIC4.28□□□□□ -1.72
NEK3P51956 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.28□□□□□ -1.72
NEK3P51956 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NEK3P51956 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
NEK3P51956 AC090740.1-201ENST00000623193 2262 ntBASIC4.28□□□□□ -1.72
NEK3P51956 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEK3P51956 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
NEK3P51956 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.27□□□□□ -1.73
NEK3P51956 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NEK3P51956 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NEK3P51956 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.27□□□□□ -1.73
NEK3P51956 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NEK3P51956 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
NEK3P51956 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.27□□□□□ -1.73
NEK3P51956 TIMM9P1-201ENST00000436122 256 ntBASIC4.27□□□□□ -1.73
NEK3P51956 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AC093156.1-201ENST00000440382 670 ntBASIC4.27□□□□□ -1.73
NEK3P51956 PGBD4P3-201ENST00000440731 581 ntBASIC4.27□□□□□ -1.73
NEK3P51956 RPL17P49-201ENST00000443728 411 ntBASIC4.27□□□□□ -1.73
NEK3P51956 RPL21P89-201ENST00000444021 467 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AL360221.1-201ENST00000445989 335 ntBASIC4.27□□□□□ -1.73
NEK3P51956 ELOCP30-201ENST00000447108 299 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.27□□□□□ -1.73
NEK3P51956 MTND1P12-201ENST00000455231 147 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 LARP1BP2-201ENST00000486594 519 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.27□□□□□ -1.73
NEK3P51956 MTND4P2-201ENST00000507767 1203 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms