Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC005183.1-201ENST00000603687 1979 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF144AP50876 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RNF144AP50876 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF144AP50876 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF144AP50876 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RNF144AP50876 LINC02555-201ENST00000563933 1951 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 RNU6-740P-201ENST00000364734 105 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF144AP50876 AC245096.1-201ENST00000413104 546 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AL354868.1-201ENST00000417077 482 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 RPL30P3-201ENST00000424262 333 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC091286.1-201ENST00000431233 461 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF144AP50876 PNKDP1-201ENST00000435914 430 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF144AP50876 RPL5P7-201ENST00000444235 813 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC118758.1-202ENST00000454719 225 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 snoU109.4-201ENST00000458953 143 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 RN7SL269P-201ENST00000467795 305 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 RPL23AP40-201ENST00000487630 390 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC083795.1-201ENST00000491760 320 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF144AP50876 RNU6-346P-201ENST00000516288 111 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC091144.1-201ENST00000519573 138 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AP000859.1-201ENST00000525536 307 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 AC092121.1-201ENST00000569452 202 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 AC119403.2-201ENST00000590960 598 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 MIR15A-201ENST00000607334 83 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 AL136228.1-201ENST00000622221 319 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNF144AP50876 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF144AP50876 AC104964.3-201ENST00000606115 2860 ntBASIC5.48□□□□□ -1.53
RNF144AP50876 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
RNF144AP50876 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF144AP50876 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 RNU6-858P-201ENST00000362436 107 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 HSPE1P8-201ENST00000406997 288 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF144AP50876 RPS15AP40-201ENST00000419621 391 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 AL663074.2-201ENST00000440621 479 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 RN7SL168P-201ENST00000463821 279 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF144AP50876 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF144AP50876 RN7SL284P-201ENST00000498823 275 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 TOMM22P4-201ENST00000511318 336 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RFPL4AP5-201ENST00000514977 504 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RNA5SP473-201ENST00000516402 125 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 AC136932.1-201ENST00000574771 208 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RN7SL652P-201ENST00000577769 300 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF144AP50876 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 AP001485.1-201ENST00000604799 199 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AC093799.2-201ENST00000610062 578 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AC092266.1-201ENST00000610958 165 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 MIR7109-201ENST00000613748 65 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 AC123768.4-201ENST00000616244 701 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 RNA5SP439-201ENST00000617595 124 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms