Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 WBP1LP4-201ENST00000505043 344 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 VN1R104P-201ENST00000505115 1009 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC006445.2-201ENST00000510061 472 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC112206.4-201ENST00000515142 405 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC104986.1-201ENST00000517978 436 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AP003102.1-201ENST00000525638 661 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.68□□□□□ -1.98
CX3CR1P49238 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC104072.1-201ENST00000568817 668 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 UBL5P2-201ENST00000583788 219 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 MAGOH2P-202ENST00000584384 429 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.68□□□□□ -1.98
CX3CR1P49238 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CR1P49238 AC018926.1-201ENST00000616335 435 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 MIR7975-201ENST00000619350 68 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC004009.2-201ENST00000623016 728 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.68□□□□□ -1.98
CX3CR1P49238 MTND5P7-201ENST00000413558 1798 ntBASIC2.68□□□□□ -1.98
CX3CR1P49238 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CX3CR1P49238 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CX3CR1P49238 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.68□□□□□ -1.98
CX3CR1P49238 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 RPL23AP57-201ENST00000332361 466 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 Y_RNA.25-201ENST00000362528 102 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 RNU6-236P-201ENST00000363886 106 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 SNORA7.4-201ENST00000384249 137 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 SNORD65.1-201ENST00000390889 71 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 RNU4-47P-201ENST00000410876 114 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.67□□□□□ -1.98
CX3CR1P49238 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 RPL27AP8-201ENST00000424277 446 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC092573.2-201ENST00000434546 243 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 RPS29P12-201ENST00000460178 152 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AP001992.1-205ENST00000462248 379 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC008837.1-201ENST00000511513 412 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CR1P49238 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 MIR5680-201ENST00000577577 84 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC011260.1-201ENST00000578420 472 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.67□□□□□ -1.98
CX3CR1P49238 CCDC58P3-201ENST00000590792 430 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC008739.3-201ENST00000603262 127 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC124016.2-201ENST00000610058 665 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC069234.5-201ENST00000611056 416 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC010975.3-201ENST00000618727 978 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC012314.7-201ENST00000619693 93 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC027309.3-201ENST00000623419 351 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AC018692.3-201ENST00000623929 123 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.67□□□□□ -1.98
CX3CR1P49238 MKKS-204ENST00000639674 192 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CX3CR1P49238 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CX3CR1P49238 AC091564.4-201ENST00000533934 2194 ntBASIC2.67□□□□□ -1.98
CX3CR1P49238 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CX3CR1P49238 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CR1P49238 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CX3CR1P49238 DEFB108F-201ENST00000344638 222 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 MIR506-201ENST00000384998 124 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 MIR1289-1-201ENST00000408836 144 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 RNU2-43P-201ENST00000410306 190 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC096533.1-201ENST00000411645 353 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC007742.1-201ENST00000425789 329 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.66□□□□□ -1.98
CX3CR1P49238 MTCO1P3-201ENST00000429327 192 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AL590233.1-201ENST00000430017 456 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 MTND2P5-201ENST00000432656 1006 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 ELOCP26-201ENST00000436067 329 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AL591503.2-201ENST00000442314 1005 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AL121871.1-201ENST00000443413 436 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 VN1R34P-201ENST00000447387 883 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms