Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL139421.1-201ENST00000423010 169 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 MTND4P32-201ENST00000437189 1237 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 MTND4P6-201ENST00000438297 472 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC140076.1-201ENST00000449897 361 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 WBP1LP4-201ENST00000505043 344 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 HMGB1P28-201ENST00000507778 552 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC079395.1-201ENST00000510981 262 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 MTCO3P28-201ENST00000513351 515 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 SNORA70.16-201ENST00000516390 95 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC023632.4-201ENST00000517783 191 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC022861.1-201ENST00000522981 663 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AL356057.1-201ENST00000533798 831 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.54□□□□□ -1.84
HNF4AP41235 ELOCP32-201ENST00000548625 324 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AC090888.1-201ENST00000561335 1141 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.54□□□□□ -1.84
HNF4AP41235 AP005136.1-201ENST00000579765 429 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AL022161.1-201ENST00000604390 213 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC064807.4-201ENST00000607201 407 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC131235.4-201ENST00000609288 620 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AL603755.1-201ENST00000619504 163 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.54□□□□□ -1.84
HNF4AP41235 AC116618.1-201ENST00000634617 774 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.54□□□□□ -1.84
HNF4AP41235 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HNF4AP41235 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HNF4AP41235 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.84
HNF4AP41235 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 U8.11-201ENST00000384699 133 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 U8.12-201ENST00000384701 133 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 MIR135A2-201ENST00000384854 100 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 MIR1302-8-201ENST00000408342 128 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.53□□□□□ -1.84
HNF4AP41235 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 AL606662.1-201ENST00000445763 553 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AL353691.1-201ENST00000451332 387 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AL109741.2-201ENST00000455561 343 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 U8.18-201ENST00000459285 133 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 RPL21P8-201ENST00000465083 535 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 RPL7P18-201ENST00000478965 734 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 RPL32P34-201ENST00000486380 400 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.53□□□□□ -1.84
HNF4AP41235 HSPE1P23-201ENST00000509838 286 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HNF4AP41235 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HNF4AP41235 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.53□□□□□ -1.84
HNF4AP41235 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.53□□□□□ -1.84
HNF4AP41235 PIGPP4-201ENST00000584447 307 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 MIR4999-201ENST00000585029 91 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AC110760.3-201ENST00000598794 467 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 BNIP3P11-201ENST00000603878 563 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AC106791.2-201ENST00000604680 391 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 AC121247.2-201ENST00000604776 136 ntBASIC3.53□□□□□ -1.84
HNF4AP41235 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
HNF4AP41235 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HNF4AP41235 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC009812.4-201ENST00000569134 1805 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HNF4AP41235 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 HSPE1P1-201ENST00000421494 318 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AL365203.2-201ENST00000423444 196 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC234781.2-201ENST00000426370 994 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 YWHAZP7-201ENST00000436906 631 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.52□□□□□ -1.85
HNF4AP41235 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 CDC27P1-201ENST00000445384 715 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 RPS29P31-201ENST00000446147 164 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 TRGVB-201ENST00000453257 471 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms