Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.78□□□□□ -1.8
HADHAP40939 AL121766.1-201ENST00000547436 487 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC007954.1-201ENST00000554198 494 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AL391156.1-201ENST00000554965 554 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC099489.2-201ENST00000574976 260 ntBASIC3.78□□□□□ -1.8
HADHAP40939 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.78□□□□□ -1.8
HADHAP40939 MIR4474-201ENST00000579189 78 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
HADHAP40939 AL360219.1-201ENST00000610230 366 ntBASIC3.78□□□□□ -1.8
HADHAP40939 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC006133.1-201ENST00000617106 264 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC091304.6-201ENST00000619761 202 ntBASIC3.78□□□□□ -1.8
HADHAP40939 FP236240.3-201ENST00000623061 327 ntBASIC3.78□□□□□ -1.8
HADHAP40939 AC079597.1-201ENST00000624306 508 ntBASIC3.78□□□□□ -1.8
HADHAP40939 PCMTD1P7-201ENST00000634506 357 ntBASIC3.78□□□□□ -1.8
HADHAP40939 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HADHAP40939 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HADHAP40939 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.78□□□□□ -1.8
HADHAP40939 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HADHAP40939 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HADHAP40939 RNY4P24-201ENST00000362735 96 ntBASIC3.77□□□□□ -1.81
HADHAP40939 RNU6-777P-201ENST00000364265 104 ntBASIC3.77□□□□□ -1.81
HADHAP40939 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HADHAP40939 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
HADHAP40939 MTND1P21-201ENST00000412991 285 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.77□□□□□ -1.81
HADHAP40939 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 AC234781.2-201ENST00000426370 994 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AL591419.1-201ENST00000427423 339 ntBASIC3.77□□□□□ -1.81
HADHAP40939 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.77□□□□□ -1.81
HADHAP40939 AC112653.1-201ENST00000443851 386 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AP000542.1-201ENST00000448473 371 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AC104308.1-201ENST00000454621 333 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.77□□□□□ -1.81
HADHAP40939 ARPC3P2-201ENST00000457786 533 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AC072039.1-201ENST00000477611 581 ntBASIC3.77□□□□□ -1.81
HADHAP40939 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.77□□□□□ -1.81
HADHAP40939 VN1R104P-201ENST00000505115 1009 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AC021678.1-201ENST00000505195 936 ntBASIC3.77□□□□□ -1.81
HADHAP40939 HSPE1P23-201ENST00000509838 286 ntBASIC3.77□□□□□ -1.81
HADHAP40939 MRPS33P3-201ENST00000513456 322 ntBASIC3.77□□□□□ -1.81
HADHAP40939 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.77□□□□□ -1.81
HADHAP40939 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.77□□□□□ -1.81
HADHAP40939 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.77□□□□□ -1.81
HADHAP40939 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.77□□□□□ -1.81
HADHAP40939 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.77□□□□□ -1.81
HADHAP40939 AP001004.1-201ENST00000582468 324 ntBASIC3.77□□□□□ -1.81
HADHAP40939 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 AP001029.3-201ENST00000588063 596 ntBASIC3.77□□□□□ -1.81
HADHAP40939 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.77□□□□□ -1.81
HADHAP40939 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
HADHAP40939 SNORA62.6-201ENST00000606322 83 ntBASIC3.77□□□□□ -1.81
HADHAP40939 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.77□□□□□ -1.81
HADHAP40939 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
HADHAP40939 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.77□□□□□ -1.81
HADHAP40939 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HADHAP40939 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HADHAP40939 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HADHAP40939 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.77□□□□□ -1.81
HADHAP40939 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HADHAP40939 AC005183.1-201ENST00000603687 1979 ntBASIC3.76□□□□□ -1.81
HADHAP40939 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
HADHAP40939 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HADHAP40939 RPL7P26-201ENST00000333817 754 ntBASIC3.76□□□□□ -1.81
HADHAP40939 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 MIR30B-201ENST00000384850 88 ntBASIC3.76□□□□□ -1.81
HADHAP40939 U3.20-201ENST00000390909 217 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AL391417.1-201ENST00000404100 426 ntBASIC3.76□□□□□ -1.81
HADHAP40939 HMGB1P11-201ENST00000413899 637 ntBASIC3.76□□□□□ -1.81
HADHAP40939 RPL27AP8-201ENST00000424277 446 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AL593851.1-201ENST00000426171 157 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC006989.1-201ENST00000427212 131 ntBASIC3.76□□□□□ -1.81
HADHAP40939 ARF4P2-201ENST00000430209 526 ntBASIC3.76□□□□□ -1.81
HADHAP40939 MTND1P20-201ENST00000430341 950 ntBASIC3.76□□□□□ -1.81
HADHAP40939 RPL7P34-201ENST00000433316 712 ntBASIC3.76□□□□□ -1.81
HADHAP40939 RSU1P2-202ENST00000437884 485 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.76□□□□□ -1.81
HADHAP40939 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.76□□□□□ -1.81
HADHAP40939 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.76□□□□□ -1.81
HADHAP40939 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.76□□□□□ -1.81
HADHAP40939 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.76□□□□□ -1.81
HADHAP40939 AC099563.1-201ENST00000456086 418 ntBASIC3.76□□□□□ -1.81
HADHAP40939 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.76□□□□□ -1.81
HADHAP40939 RPL30P9-201ENST00000465586 330 ntBASIC3.76□□□□□ -1.81
HADHAP40939 LTV1P1-201ENST00000510683 1237 ntBASIC3.76□□□□□ -1.81
HADHAP40939 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
HADHAP40939 PAICSP4-201ENST00000517543 1253 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 AP004247.1-201ENST00000531556 1289 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.76□□□□□ -1.81
HADHAP40939 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms