Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXD12P35452 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXD12P35452 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXD12P35452 MIR5685-201ENST00000579080 79 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD12P35452 AP003465.2-201ENST00000602571 373 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AL606490.9-201ENST00000603331 271 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC011816.2-201ENST00000607089 556 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC013476.2-201ENST00000614456 459 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC039056.2-201ENST00000622261 511 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD12P35452 AC068137.3-201ENST00000639191 341 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC073869.6-201ENST00000640656 341 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 Y_RNA.6-201ENST00000362350 114 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 SNORD46.1-201ENST00000364139 104 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 SNORD6-201ENST00000365444 73 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD12P35452 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 RNU6-533P-201ENST00000384144 107 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 RNU6-297P-201ENST00000384636 107 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AL583835.1-201ENST00000399570 407 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AC097374.1-203ENST00000400783 485 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 MTND1P4-201ENST00000435196 415 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AL022238.1-201ENST00000442557 355 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HOXD12P35452 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 RPL7P36-201ENST00000444633 681 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD12P35452 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 LARP1BP2-201ENST00000486594 519 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD12P35452 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXD12P35452 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HOXD12P35452 OR5M7P-201ENST00000526140 972 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD12P35452 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 HSPE1P5-201ENST00000561489 272 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD12P35452 MTATP6P3-201ENST00000581686 676 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 AC244505.7-201ENST00000599675 272 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 BCRP9-201ENST00000605312 388 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD12P35452 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 AF127577.6-201ENST00000623352 2191 ntBASIC4.18□□□□□ -1.74
HOXD12P35452 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD12P35452 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 SNORA71.3-201ENST00000362582 128 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 RNU6-769P-201ENST00000384407 104 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 RNU11-4P-201ENST00000391149 133 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 U3.29-201ENST00000391296 212 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 MTCO1P17-201ENST00000411522 491 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 FCF1P9-201ENST00000412546 282 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 HMGB3P23-201ENST00000414981 585 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 Z97055.1-201ENST00000419730 712 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 MTCO2P5-201ENST00000422621 426 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 SKP1P1-201ENST00000438081 489 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC244505.5-201ENST00000443639 207 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 MTCO1P42-201ENST00000457379 726 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 snoU109.1-201ENST00000459339 135 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 RPL38P1-201ENST00000460914 211 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 KLF3P2-201ENST00000465138 268 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC087312.1-201ENST00000471411 480 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 HMGB1P36-201ENST00000487709 576 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms