Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BX295541.1-201ENST00000417774 250 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 USP9YP36-201ENST00000424581 829 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RPL23AP25-201ENST00000430973 463 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 ARPC3P1-201ENST00000437218 533 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.88□□□□□ -1.63
CNGA1P29973 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.88□□□□□ -1.63
CNGA1P29973 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 RPL5P30-201ENST00000465511 891 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 FTH1P21-201ENST00000512179 511 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.88□□□□□ -1.63
CNGA1P29973 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 AC016957.1-201ENST00000534895 309 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AL133271.1-201ENST00000538229 291 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.88□□□□□ -1.63
CNGA1P29973 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.88□□□□□ -1.63
CNGA1P29973 AC005255.1-201ENST00000593748 216 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 KC877982.1-201ENST00000602313 470 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AC007038.2-201ENST00000608095 740 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 uc_338.12-201ENST00000616344 181 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 MIR6130-201ENST00000619419 109 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.88□□□□□ -1.63
CNGA1P29973 AC007390.2-201ENST00000606229 3803 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.87□□□□□ -1.63
CNGA1P29973 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.87□□□□□ -1.63
CNGA1P29973 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CNGA1P29973 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 RNU6-637P-201ENST00000384050 107 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 HMGN1P24-201ENST00000412282 298 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 MTND3P17-201ENST00000416968 344 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.87□□□□□ -1.63
CNGA1P29973 PDSS1P1-201ENST00000422953 1114 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC019097.1-201ENST00000424783 735 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL157831.1-201ENST00000426134 473 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
CNGA1P29973 USP9YP28-201ENST00000435142 589 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC104850.1-201ENST00000435940 476 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 MTND1P1-201ENST00000445453 368 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC079448.1-201ENST00000449377 373 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC234775.1-201ENST00000454247 670 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL359385.1-201ENST00000456509 365 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 RPL23AP65-201ENST00000475608 468 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 RBM43P1-201ENST00000476891 1081 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AC108022.1-201ENST00000493466 478 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC107401.1-201ENST00000503426 685 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AC010587.1-201ENST00000505809 469 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.87□□□□□ -1.63
CNGA1P29973 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.87□□□□□ -1.63
CNGA1P29973 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AL133153.1-201ENST00000557756 303 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC087481.2-201ENST00000565492 330 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL391840.1-201ENST00000571144 367 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL121834.1-201ENST00000572284 509 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC099489.2-201ENST00000574976 260 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.87□□□□□ -1.63
CNGA1P29973 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.87□□□□□ -1.63
CNGA1P29973 AP003465.2-201ENST00000602571 373 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC245014.2-201ENST00000603689 287 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC246785.4-201ENST00000605374 287 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC090970.3-201ENST00000612566 866 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL021997.2-201ENST00000615674 271 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AC138649.3-201ENST00000622154 254 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 AL445363.3-201ENST00000623080 671 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 OR5AK4P-201ENST00000635912 903 ntBASIC4.87□□□□□ -1.63
CNGA1P29973 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNGA1P29973 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.87□□□□□ -1.63
CNGA1P29973 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.87□□□□□ -1.63
CNGA1P29973 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.86□□□□□ -1.63
CNGA1P29973 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNGA1P29973 NOL8P1-201ENST00000508336 3529 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 Y_RNA.6-201ENST00000362350 114 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 RNU6-754P-201ENST00000391166 107 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC097374.1-203ENST00000400783 485 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 RNU6-516P-201ENST00000411381 104 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 EI24P1-201ENST00000416584 867 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 PIGFP2-201ENST00000421400 651 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms