Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.89□□□□□ -1.47
VARSP26640 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.89□□□□□ -1.47
VARSP26640 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.89□□□□□ -1.47
VARSP26640 AL391987.1-201ENST00000441025 200 ntBASIC5.89□□□□□ -1.47
VARSP26640 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.89□□□□□ -1.47
VARSP26640 AC239809.1-201ENST00000450470 217 ntBASIC5.89□□□□□ -1.47
VARSP26640 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.89□□□□□ -1.47
VARSP26640 AP000797.2-201ENST00000475768 606 ntBASIC5.89□□□□□ -1.47
VARSP26640 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.89□□□□□ -1.47
VARSP26640 PPIAP19-201ENST00000486414 492 ntBASIC5.89□□□□□ -1.47
VARSP26640 RPS23P5-201ENST00000495419 428 ntBASIC5.89□□□□□ -1.47
VARSP26640 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.89□□□□□ -1.47
VARSP26640 OR51K1P-201ENST00000510214 950 ntBASIC5.89□□□□□ -1.47
VARSP26640 RNU6-677P-201ENST00000516914 101 ntBASIC5.89□□□□□ -1.47
VARSP26640 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.89□□□□□ -1.47
VARSP26640 AC068790.4-201ENST00000602474 263 ntBASIC5.89□□□□□ -1.47
VARSP26640 AP001485.1-201ENST00000604799 199 ntBASIC5.89□□□□□ -1.47
VARSP26640 AC007619.2-201ENST00000605743 379 ntBASIC5.89□□□□□ -1.47
VARSP26640 AC109309.2-201ENST00000612597 332 ntBASIC5.89□□□□□ -1.47
VARSP26640 AC116447.1-201ENST00000613153 453 ntBASIC5.89□□□□□ -1.47
VARSP26640 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.89□□□□□ -1.47
VARSP26640 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.89□□□□□ -1.47
VARSP26640 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 RLIMP1-201ENST00000339626 1680 ntBASIC5.88□□□□□ -1.47
VARSP26640 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARSP26640 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARSP26640 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARSP26640 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.88□□□□□ -1.47
VARSP26640 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 RNU6-858P-201ENST00000362436 107 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNA5SP453-201ENST00000362503 119 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNU4-44P-201ENST00000363050 141 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNY1P5-201ENST00000383890 115 ntBASIC5.88□□□□□ -1.47
VARSP26640 SNORD51-201ENST00000384320 80 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNU6-933P-201ENST00000384424 107 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNU6-700P-201ENST00000391043 107 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNA5SP156-201ENST00000410250 110 ntBASIC5.88□□□□□ -1.47
VARSP26640 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.88□□□□□ -1.47
VARSP26640 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 AC099336.2-201ENST00000422457 254 ntBASIC5.88□□□□□ -1.47
VARSP26640 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
VARSP26640 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.88□□□□□ -1.47
VARSP26640 CEACAMP1-201ENST00000434624 1035 ntBASIC5.88□□□□□ -1.47
VARSP26640 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.88□□□□□ -1.47
VARSP26640 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VARSP26640 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.88□□□□□ -1.47
VARSP26640 AL162389.1-201ENST00000449233 177 ntBASIC5.88□□□□□ -1.47
VARSP26640 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 AC099560.2-201ENST00000457554 255 ntBASIC5.88□□□□□ -1.47
VARSP26640 RPL37P6-201ENST00000460682 294 ntBASIC5.88□□□□□ -1.47
VARSP26640 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.88□□□□□ -1.47
VARSP26640 RN7SL352P-201ENST00000466002 277 ntBASIC5.88□□□□□ -1.47
VARSP26640 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.88□□□□□ -1.47
VARSP26640 AL359273.1-201ENST00000510918 627 ntBASIC5.88□□□□□ -1.47
VARSP26640 AC113155.1-201ENST00000511141 769 ntBASIC5.88□□□□□ -1.47
VARSP26640 RNU6-390P-201ENST00000516259 103 ntBASIC5.88□□□□□ -1.47
VARSP26640 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.88□□□□□ -1.47
VARSP26640 IGLVIV-53-201ENST00000520107 367 ntBASIC5.88□□□□□ -1.47
VARSP26640 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.88□□□□□ -1.47
VARSP26640 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 AC025884.1-201ENST00000556034 378 ntBASIC5.88□□□□□ -1.47
VARSP26640 HNRNPCP4-201ENST00000571636 900 ntBASIC5.88□□□□□ -1.47
VARSP26640 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.88□□□□□ -1.47
VARSP26640 AC129915.3-201ENST00000634128 948 ntBASIC5.88□□□□□ -1.47
VARSP26640 CYP4F35P-202ENST00000636121 390 ntBASIC5.88□□□□□ -1.47
VARSP26640 GNL2P1-201ENST00000451274 2190 ntBASIC5.88□□□□□ -1.47
VARSP26640 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.88□□□□□ -1.47
VARSP26640 STX3-208ENST00000641815 3236 ntBASIC5.88□□□□□ -1.47
VARSP26640 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VARSP26640 AC009643.2-201ENST00000603543 1448 ntBASIC5.88□□□□□ -1.47
VARSP26640 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARSP26640 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
VARSP26640 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARSP26640 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARSP26640 MFSD8-239ENST00000641590 2479 ntBASIC5.87□□□□□ -1.47
VARSP26640 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARSP26640 SNORA51.1-201ENST00000363243 140 ntBASIC5.87□□□□□ -1.47
VARSP26640 RNU6-1317P-201ENST00000364582 104 ntBASIC5.87□□□□□ -1.47
VARSP26640 RN7SKP69-201ENST00000365390 305 ntBASIC5.87□□□□□ -1.47
VARSP26640 RNU6-81P-201ENST00000365608 104 ntBASIC5.87□□□□□ -1.47
VARSP26640 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VARSP26640 RNU6-1027P-201ENST00000383998 107 ntBASIC5.87□□□□□ -1.47
VARSP26640 AL096829.1-201ENST00000413677 457 ntBASIC5.87□□□□□ -1.47
VARSP26640 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.87□□□□□ -1.47
VARSP26640 RPL21P90-201ENST00000415692 466 ntBASIC5.87□□□□□ -1.47
VARSP26640 RPS15AP6-201ENST00000420703 385 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms