Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TOMM22P1-201ENST00000418578 312 ntBASIC4.31□□□□□ -1.72
CD40P25942 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.31□□□□□ -1.72
CD40P25942 RPL21P112-201ENST00000434403 463 ntBASIC4.31□□□□□ -1.72
CD40P25942 KCTD9P3-201ENST00000434597 1169 ntBASIC4.31□□□□□ -1.72
CD40P25942 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.31□□□□□ -1.72
CD40P25942 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 Z80107.2-201ENST00000445127 392 ntBASIC4.31□□□□□ -1.72
CD40P25942 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.31□□□□□ -1.72
CD40P25942 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.31□□□□□ -1.72
CD40P25942 RNU6-329P-201ENST00000459618 107 ntBASIC4.31□□□□□ -1.72
CD40P25942 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
CD40P25942 AC004801.2-202ENST00000463559 283 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC010285.1-201ENST00000470580 392 ntBASIC4.31□□□□□ -1.72
CD40P25942 RN7SKP256-201ENST00000517201 314 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.31□□□□□ -1.72
CD40P25942 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.31□□□□□ -1.72
CD40P25942 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 AC011611.1-201ENST00000552179 197 ntBASIC4.31□□□□□ -1.72
CD40P25942 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.31□□□□□ -1.72
CD40P25942 AL121576.1-201ENST00000556055 276 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC005498.1-201ENST00000592125 465 ntBASIC4.31□□□□□ -1.72
CD40P25942 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 AC099654.10-201ENST00000640395 161 ntBASIC4.31□□□□□ -1.72
CD40P25942 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.31□□□□□ -1.72
CD40P25942 AC004925.1-201ENST00000624256 2706 ntBASIC4.31□□□□□ -1.72
CD40P25942 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
CD40P25942 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CD40P25942 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD40P25942 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD40P25942 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD40P25942 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.31□□□□□ -1.72
CD40P25942 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD40P25942 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.3□□□□□ -1.72
CD40P25942 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CD40P25942 AC008079.2-201ENST00000623543 20396 ntBASIC4.3□□□□□ -1.72
CD40P25942 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 Y_RNA.184-201ENST00000363884 108 ntBASIC4.3□□□□□ -1.72
CD40P25942 RNU4-76P-201ENST00000364509 141 ntBASIC4.3□□□□□ -1.72
CD40P25942 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 RNU6-190P-201ENST00000384154 102 ntBASIC4.3□□□□□ -1.72
CD40P25942 RNA5SP87-201ENST00000384155 118 ntBASIC4.3□□□□□ -1.72
CD40P25942 RNU6-831P-201ENST00000384548 107 ntBASIC4.3□□□□□ -1.72
CD40P25942 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD40P25942 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC092809.3-201ENST00000415453 231 ntBASIC4.3□□□□□ -1.72
CD40P25942 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 ARL5AP1-201ENST00000418991 388 ntBASIC4.3□□□□□ -1.72
CD40P25942 CALM2P2-201ENST00000428512 440 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.3□□□□□ -1.72
CD40P25942 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.3□□□□□ -1.72
CD40P25942 AC020550.1-201ENST00000447385 163 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 PPP1R2P5-201ENST00000457256 603 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC083904.1-201ENST00000487828 231 ntBASIC4.3□□□□□ -1.72
CD40P25942 MLLT10P2-201ENST00000506434 249 ntBASIC4.3□□□□□ -1.72
CD40P25942 MTCO3P9-201ENST00000506989 781 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 FAM206BP-201ENST00000510179 541 ntBASIC4.3□□□□□ -1.72
CD40P25942 Y_RNA.689-201ENST00000516589 107 ntBASIC4.3□□□□□ -1.72
CD40P25942 RNU6-685P-201ENST00000517088 95 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.3□□□□□ -1.72
CD40P25942 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.3□□□□□ -1.72
CD40P25942 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.3□□□□□ -1.72
CD40P25942 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC026464.5-201ENST00000562497 722 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.3□□□□□ -1.72
CD40P25942 AC006363.1-201ENST00000603806 463 ntBASIC4.3□□□□□ -1.72
CD40P25942 RNU4-89P-201ENST00000607443 133 ntBASIC4.3□□□□□ -1.72
CD40P25942 AC019206.1-201ENST00000621938 425 ntBASIC4.3□□□□□ -1.72
CD40P25942 MIR1302-1-201ENST00000637932 143 ntBASIC4.3□□□□□ -1.72
CD40P25942 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD40P25942 AC025031.4-201ENST00000621248 3271 ntBASIC4.3□□□□□ -1.72
CD40P25942 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CD40P25942 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40P25942 SDAD1P1-202ENST00000524156 2051 ntBASIC4.3□□□□□ -1.72
CD40P25942 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 OR9K1P-202ENST00000641111 3217 ntBASIC4.29□□□□□ -1.72
CD40P25942 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 SMG1P4-204ENST00000523028 4131 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms