Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
XRCC1P18887 AC091925.2-201ENST00000625059 256 ntBASIC3.12□□□□□ -1.91
XRCC1P18887 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
XRCC1P18887 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
XRCC1P18887 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
XRCC1P18887 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.11□□□□□ -1.91
XRCC1P18887 MTND5P19-201ENST00000424872 1794 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 RNU6-413P-201ENST00000384115 107 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 SNORA7.4-201ENST00000384249 137 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 SNRPEP2-201ENST00000397592 279 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 RNU2-15P-201ENST00000410692 191 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 SDCBPP3-201ENST00000419629 891 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.11□□□□□ -1.91
XRCC1P18887 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
XRCC1P18887 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.11□□□□□ -1.91
XRCC1P18887 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.11□□□□□ -1.91
XRCC1P18887 SUMO2P2-201ENST00000456482 255 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 OR4G11P-201ENST00000492842 939 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.11□□□□□ -1.91
XRCC1P18887 RNU6-27P-201ENST00000516146 107 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 SCARNA1-201ENST00000517138 166 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 HSPA8P13-201ENST00000523715 472 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.11□□□□□ -1.91
XRCC1P18887 LARP7P2-201ENST00000575306 125 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC005951.1-201ENST00000576706 485 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC245036.5-201ENST00000596330 847 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC091057.3-201ENST00000602684 733 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC005000.2-201ENST00000605468 310 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AL591516.1-201ENST00000611326 274 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.11□□□□□ -1.91
XRCC1P18887 AL158163.2-201ENST00000619110 700 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 AC018755.4-201ENST00000619715 454 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.11□□□□□ -1.91
XRCC1P18887 AC109315.1-201ENST00000584143 1347 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
XRCC1P18887 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
XRCC1P18887 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
XRCC1P18887 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
XRCC1P18887 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 OR1S2-201ENST00000302592 978 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 RNU6-560P-201ENST00000364007 108 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 DYNLT3P1-201ENST00000378574 347 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 Y_RNA.472-201ENST00000384322 102 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AL450338.1-201ENST00000407987 512 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 AL590103.1-201ENST00000434488 307 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 RPL7P52-201ENST00000449200 742 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 OFD1P3Y-201ENST00000453312 783 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC026410.2-201ENST00000460281 156 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC011979.1-201ENST00000472300 483 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 RPS29P2-201ENST00000479278 136 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC006483.1-201ENST00000487308 313 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC114981.1-201ENST00000503897 678 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC006390.1-201ENST00000508068 283 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 OR10V3P-201ENST00000525712 725 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC087481.2-201ENST00000565492 330 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 MIR4325-201ENST00000583049 90 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
XRCC1P18887 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.1□□□□□ -1.91
XRCC1P18887 AC004987.4-201ENST00000603383 338 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 VIS1.1-201ENST00000610517 203 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.1□□□□□ -1.91
XRCC1P18887 MIR1322-201ENST00000638013 71 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 OR5BR1P-201ENST00000524992 1330 ntBASIC3.1□□□□□ -1.91
XRCC1P18887 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
XRCC1P18887 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
XRCC1P18887 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
XRCC1P18887 NACA3P-201ENST00000359690 648 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RNU6-50P-201ENST00000362356 103 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RNU6-1122P-201ENST00000384449 107 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 CYCSP45-201ENST00000402289 315 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AL590084.1-201ENST00000407885 387 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RPS3AP37-201ENST00000419176 745 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 PSMA6P3-201ENST00000428242 164 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms