Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MTND5P23-201ENST00000430812 1655 ntBASIC4.44□□□□□ -1.7
COL11A2P13942 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A2P13942 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
COL11A2P13942 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A2P13942 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL11A2P13942 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL11A2P13942 AC007685.1-201ENST00000329806 452 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 Y_RNA.162-201ENST00000363683 102 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 Y_RNA.509-201ENST00000384506 99 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPL23AP47-201ENST00000408017 460 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RN7SKP53-201ENST00000411337 315 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A2P13942 AL513174.1-201ENST00000423182 629 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC087650.1-201ENST00000431445 468 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC007677.1-201ENST00000445757 515 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A2P13942 MTCO3P20-201ENST00000454926 688 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPS20P24-201ENST00000457473 361 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC108078.3-201ENST00000502633 489 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 POU5F1P7-201ENST00000508759 541 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AF131216.2-201ENST00000512316 564 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 RNU6-1261P-201ENST00000517194 104 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AP001189.2-201ENST00000527320 189 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 AK6P1-201ENST00000540219 478 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.43□□□□□ -1.7
COL11A2P13942 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC112187.2-201ENST00000604345 283 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC135507.2-201ENST00000612443 309 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC068880.5-201ENST00000624331 290 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC119674.1-212ENST00000641155 993 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC007529.1-201ENST00000418574 2178 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPL23AP57-201ENST00000332361 466 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RNU6-666P-201ENST00000363499 107 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RNU6-483P-201ENST00000384088 108 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RNU6-1122P-201ENST00000384449 107 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL11A2P13942 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 BX323014.1-201ENST00000412876 237 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPS3AP9-201ENST00000417027 792 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 BX295541.1-201ENST00000417774 250 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.43□□□□□ -1.7
COL11A2P13942 MTND6P13-201ENST00000443510 523 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL11A2P13942 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC022364.2-201ENST00000457963 554 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPL7P48-201ENST00000461513 746 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RN7SL807P-201ENST00000470923 297 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AL136126.1-201ENST00000473603 402 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC022795.1-201ENST00000473808 480 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 RPS3AP14-201ENST00000483907 780 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC026412.2-201ENST00000512270 1075 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 EIF4BP1-201ENST00000554881 351 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.43□□□□□ -1.7
COL11A2P13942 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.43□□□□□ -1.7
COL11A2P13942 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.43□□□□□ -1.7
COL11A2P13942 AC006116.10-201ENST00000591836 581 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 AL596327.1-201ENST00000603629 213 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.43□□□□□ -1.7
COL11A2P13942 FRG1KP-201ENST00000623592 341 ntBASIC4.43□□□□□ -1.7
COL11A2P13942 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.42□□□□□ -1.7
COL11A2P13942 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A2P13942 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL11A2P13942 AC090337.1-201ENST00000579651 2074 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 FARSBP1-201ENST00000435808 1778 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A2P13942 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A2P13942 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A2P13942 Y_RNA.25-201ENST00000362528 102 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 RNU6-839P-201ENST00000363347 108 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A2P13942 RNU6-780P-201ENST00000391030 104 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 RPL23AP29-201ENST00000397284 453 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 SNRPEP2-201ENST00000397592 279 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 FAT1P1-201ENST00000406588 507 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 MIR1302-11-201ENST00000408051 138 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 MIR1302-9-201ENST00000408365 138 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 MIR1302-10-201ENST00000408734 138 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A2P13942 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A2P13942 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A2P13942 AC073464.1-201ENST00000429823 534 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A2P13942 ARPC3P1-201ENST00000437218 533 ntBASIC4.42□□□□□ -1.7
COL11A2P13942 AC010655.1-201ENST00000449336 292 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms