Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 HMGB3P8-201ENST00000449709 577 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC005297.2-201ENST00000450430 606 ntBASIC3.62□□□□□ -1.83
CDH1P12830 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH1P12830 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 OR6K1P-201ENST00000456766 971 ntBASIC3.62□□□□□ -1.83
CDH1P12830 PLGLA-201ENST00000465668 449 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC093767.1-201ENST00000504523 156 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC022447.3-201ENST00000506865 495 ntBASIC3.62□□□□□ -1.83
CDH1P12830 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AC024589.1-201ENST00000512207 263 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC026402.1-201ENST00000513642 170 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 RN7SKP82-201ENST00000516786 223 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC022861.1-201ENST00000522981 663 ntBASIC3.62□□□□□ -1.83
CDH1P12830 OR5AP1P-201ENST00000529730 940 ntBASIC3.62□□□□□ -1.83
CDH1P12830 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 MIR5697-201ENST00000578045 78 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 AC005771.1-201ENST00000585581 349 ntBASIC3.62□□□□□ -1.83
CDH1P12830 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH1P12830 AC073648.5-201ENST00000603502 305 ntBASIC3.62□□□□□ -1.83
CDH1P12830 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC104010.1-201ENST00000616889 150 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC073968.1-201ENST00000618594 637 ntBASIC3.62□□□□□ -1.83
CDH1P12830 AC092628.2-201ENST00000622492 339 ntBASIC3.62□□□□□ -1.83
CDH1P12830 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH1P12830 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH1P12830 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CDH1P12830 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 AC026951.1-201ENST00000559530 2459 ntBASIC3.61□□□□□ -1.83
CDH1P12830 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH1P12830 Y_RNA.3-201ENST00000362331 103 ntBASIC3.61□□□□□ -1.83
CDH1P12830 RPL31P1-201ENST00000398116 372 ntBASIC3.61□□□□□ -1.83
CDH1P12830 RNU6-648P-201ENST00000410190 107 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AF274854.1-201ENST00000413236 615 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH1P12830 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 AL139247.1-201ENST00000422768 325 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 AL356583.2-201ENST00000426536 280 ntBASIC3.61□□□□□ -1.83
CDH1P12830 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 PAXBP1P1-201ENST00000449315 447 ntBASIC3.61□□□□□ -1.83
CDH1P12830 SUMO2P2-201ENST00000456482 255 ntBASIC3.61□□□□□ -1.83
CDH1P12830 BTF3P5-201ENST00000457252 467 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 UBDP1-202ENST00000457888 382 ntBASIC3.61□□□□□ -1.83
CDH1P12830 RPL37P6-202ENST00000464216 403 ntBASIC3.61□□□□□ -1.83
CDH1P12830 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH1P12830 FAM172BP-201ENST00000487497 1089 ntBASIC3.61□□□□□ -1.83
CDH1P12830 HMGB1P36-201ENST00000487709 576 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 MTND2P33-201ENST00000506452 1031 ntBASIC3.61□□□□□ -1.83
CDH1P12830 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH1P12830 AC034159.1-201ENST00000513885 583 ntBASIC3.61□□□□□ -1.83
CDH1P12830 RN7SKP277-201ENST00000516895 283 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH1P12830 AC022790.1-201ENST00000522872 204 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
CDH1P12830 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.61□□□□□ -1.83
CDH1P12830 OR6C73P-201ENST00000546432 358 ntBASIC3.61□□□□□ -1.83
CDH1P12830 EIF1P4-201ENST00000572664 335 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH1P12830 RPL23AP92-201ENST00000603609 255 ntBASIC3.61□□□□□ -1.83
CDH1P12830 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.61□□□□□ -1.83
CDH1P12830 AC087241.4-201ENST00000612441 480 ntBASIC3.61□□□□□ -1.83
CDH1P12830 CRYM-AS1-204ENST00000637983 556 ntBASIC3.61□□□□□ -1.83
CDH1P12830 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH1P12830 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH1P12830 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 AL356473.1-201ENST00000406203 1408 ntBASIC3.61□□□□□ -1.83
CDH1P12830 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH1P12830 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH1P12830 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CDH1P12830 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDH1P12830 Y_RNA.41-201ENST00000362646 102 ntBASIC3.6□□□□□ -1.83
CDH1P12830 RNU6-730P-201ENST00000383954 104 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms