Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 VN1R9P-201ENST00000614184 867 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AC093591.3-201ENST00000634516 308 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 MTND5P29-201ENST00000458676 1807 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A2P08572 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A2P08572 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.19□□□□□ -2.06
COL4A2P08572 MTND5P28-201ENST00000438005 1594 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A2P08572 SNORD115-48-201ENST00000364764 76 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 SNORD51.1-201ENST00000365405 77 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A2P08572 DNAJC19P6-201ENST00000401853 280 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 RNU4-74P-201ENST00000411280 161 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC092745.2-202ENST00000411880 369 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A2P08572 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A2P08572 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.19□□□□□ -2.06
COL4A2P08572 RPL7P29-201ENST00000437151 728 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.19□□□□□ -2.06
COL4A2P08572 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A2P08572 RPL21P2-201ENST00000440049 481 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 SNORD108-201ENST00000459332 71 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.19□□□□□ -2.06
COL4A2P08572 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.19□□□□□ -2.06
COL4A2P08572 AC008494.2-201ENST00000514544 370 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 RNU4-60P-201ENST00000517239 135 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A2P08572 AC068339.2-201ENST00000534395 618 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A2P08572 AC091488.1-201ENST00000604239 660 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC011374.2-201ENST00000607135 526 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC245517.5-201ENST00000611529 162 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC121761.2-201ENST00000617300 689 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC090617.9-201ENST00000623751 147 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 MIR4496-201ENST00000635896 61 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 AC083865.1-201ENST00000636634 831 ntBASIC2.19□□□□□ -2.06
COL4A2P08572 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
COL4A2P08572 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A2P08572 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 DCAF13P3-201ENST00000561147 1334 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL4A2P08572 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL4A2P08572 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A2P08572 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 RNU2-17P-201ENST00000410290 190 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A2P08572 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 RPL23AP33-201ENST00000442301 452 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 SNORA31.13-201ENST00000516624 135 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A2P08572 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A2P08572 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A2P08572 AC008562.1-201ENST00000521763 330 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 C1DP5-201ENST00000525775 383 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 CENPUP2-201ENST00000555897 1186 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A2P08572 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.18□□□□□ -2.06
COL4A2P08572 AC079791.1-201ENST00000605356 973 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AC018754.1-201ENST00000607486 925 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AC012467.1-201ENST00000607740 256 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AL451074.6-201ENST00000608512 729 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 AC105429.2-201ENST00000610567 517 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 CU459211.1-201ENST00000635667 749 ntBASIC2.18□□□□□ -2.06
COL4A2P08572 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A2P08572 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A2P08572 AL356292.1-201ENST00000283110 373 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 U3.15-201ENST00000365398 212 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC007390.1-201ENST00000415722 356 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A2P08572 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A2P08572 AC146507.1-201ENST00000468335 354 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A2P08572 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.17□□□□□ -2.06
COL4A2P08572 RNU6-548P-201ENST00000517083 115 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AP000942.3-201ENST00000603702 160 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AL022099.1-201ENST00000604551 712 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC092184.1-201ENST00000625042 715 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A2P08572 MTCO1P14-201ENST00000441695 1559 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 OR4G2P-202ENST00000641004 1759 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
COL4A2P08572 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A2P08572 RNU6-1159P-201ENST00000362933 107 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A2P08572 RNU6-356P-201ENST00000384140 107 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 RAD23BP2-201ENST00000416003 1207 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A2P08572 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A2P08572 USP9YP7-201ENST00000436723 430 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A2P08572 USP9YP32-201ENST00000452432 430 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 RPL23AP42-201ENST00000471152 471 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms