Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC091905.1-201ENST00000624400 311 ntBASIC4.29□□□□□ -1.72
RHOP08100 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RHOP08100 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RHOP08100 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.28□□□□□ -1.72
RHOP08100 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RHOP08100 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
RHOP08100 Y_RNA.89-201ENST00000363031 102 ntBASIC4.28□□□□□ -1.72
RHOP08100 RNU6-1090P-201ENST00000364065 94 ntBASIC4.28□□□□□ -1.72
RHOP08100 RNU6-853P-201ENST00000364306 107 ntBASIC4.28□□□□□ -1.72
RHOP08100 RPL23AP32-201ENST00000395315 459 ntBASIC4.28□□□□□ -1.72
RHOP08100 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 HSPD1P16-201ENST00000402302 394 ntBASIC4.28□□□□□ -1.72
RHOP08100 RNU2-41P-201ENST00000410991 178 ntBASIC4.28□□□□□ -1.72
RHOP08100 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 NUP35P2-201ENST00000416748 943 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC012498.1-201ENST00000424037 437 ntBASIC4.28□□□□□ -1.72
RHOP08100 RPL31P35-201ENST00000431058 377 ntBASIC4.28□□□□□ -1.72
RHOP08100 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 RPS29P25-201ENST00000481709 171 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC007182.2-201ENST00000489251 402 ntBASIC4.28□□□□□ -1.72
RHOP08100 MTCYBP18-201ENST00000501056 747 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
RHOP08100 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 RNU6-358P-201ENST00000516564 75 ntBASIC4.28□□□□□ -1.72
RHOP08100 PHBP17-201ENST00000528576 541 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.28□□□□□ -1.72
RHOP08100 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 AC068790.5-201ENST00000602741 355 ntBASIC4.28□□□□□ -1.72
RHOP08100 AL592436.1-201ENST00000605135 558 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.28□□□□□ -1.72
RHOP08100 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.28□□□□□ -1.72
RHOP08100 AL138721.1-201ENST00000616756 179 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RHOP08100 AL354798.1-201ENST00000622505 329 ntBASIC4.28□□□□□ -1.72
RHOP08100 CR392039.5-201ENST00000623201 510 ntBASIC4.28□□□□□ -1.72
RHOP08100 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
RHOP08100 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.28□□□□□ -1.72
RHOP08100 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
RHOP08100 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHOP08100 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RHOP08100 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.27□□□□□ -1.73
RHOP08100 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.27□□□□□ -1.73
RHOP08100 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 RNU6-1085P-201ENST00000363576 107 ntBASIC4.27□□□□□ -1.73
RHOP08100 MIR200C-201ENST00000384980 68 ntBASIC4.27□□□□□ -1.73
RHOP08100 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RHOP08100 MTND4LP20-201ENST00000402379 270 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL590704.1-201ENST00000402856 794 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC078974.1-201ENST00000411597 223 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 MTATP6P27-201ENST00000416987 621 ntBASIC4.27□□□□□ -1.73
RHOP08100 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 MTCO1P20-201ENST00000425366 358 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 USP12PX-201ENST00000432383 1057 ntBASIC4.27□□□□□ -1.73
RHOP08100 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.27□□□□□ -1.73
RHOP08100 TBCAP1-201ENST00000436520 327 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 SNRPEP8-201ENST00000442866 260 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL133547.1-201ENST00000448546 220 ntBASIC4.27□□□□□ -1.73
RHOP08100 MTND1P12-201ENST00000455231 147 ntBASIC4.27□□□□□ -1.73
RHOP08100 AP1S2P1-201ENST00000457344 379 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL136126.1-201ENST00000473603 402 ntBASIC4.27□□□□□ -1.73
RHOP08100 RNF138P1-201ENST00000502765 546 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC093767.1-201ENST00000504523 156 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC098799.2-201ENST00000509466 868 ntBASIC4.27□□□□□ -1.73
RHOP08100 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms