Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU6-1316P-201ENST00000384242 108 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SFTPBP07988 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SFTPBP07988 RPL17P50-201ENST00000396131 546 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SFTPBP07988 MTND4P13-201ENST00000402078 1023 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL356421.1-201ENST00000403255 413 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 MTHFD2P2-201ENST00000407725 247 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 HMGB1P49-201ENST00000418882 569 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 TXNL1P1-201ENST00000429528 554 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.11□□□□□ -1.91
SFTPBP07988 RPL26P6-201ENST00000440913 438 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC022483.1-201ENST00000514020 567 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 ERHP1-201ENST00000523006 310 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.11□□□□□ -1.91
SFTPBP07988 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SFTPBP07988 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.11□□□□□ -1.91
SFTPBP07988 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SFTPBP07988 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC023161.2-201ENST00000551218 780 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 GTF2IP22-201ENST00000554443 182 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC087465.1-201ENST00000560574 245 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AP005205.1-201ENST00000563503 508 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC090186.1-201ENST00000605991 572 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL158211.4-201ENST00000606988 584 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AC008443.7-201ENST00000622195 246 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 AP000553.6-201ENST00000641242 118 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 AL732372.2-225ENST00000642124 456 ntBASIC3.11□□□□□ -1.91
SFTPBP07988 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
SFTPBP07988 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SFTPBP07988 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPBP07988 AL136164.4-201ENST00000625013 2135 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
SFTPBP07988 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 SNORA71.3-201ENST00000362582 128 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 SNORA73.2-201ENST00000364946 201 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SFTPBP07988 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SFTPBP07988 PIGPP2-201ENST00000411569 458 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 MTND1P32-201ENST00000433043 938 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AL592447.1-201ENST00000447592 540 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 RSL24D1P3-201ENST00000449255 495 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 PAXBP1P1-201ENST00000449315 447 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPBP07988 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AL359385.1-201ENST00000456509 365 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.1□□□□□ -1.91
SFTPBP07988 SNORD121B-201ENST00000458838 81 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 SNORD11.1-201ENST00000459482 85 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AL133162.1-201ENST00000463228 453 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
SFTPBP07988 AC104563.1-201ENST00000476147 376 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.1□□□□□ -1.91
SFTPBP07988 AC026801.2-201ENST00000515352 425 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 RNU5A-4P-201ENST00000516588 111 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.1□□□□□ -1.91
SFTPBP07988 AC055876.1-202ENST00000567053 138 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 RNU1-30P-201ENST00000606575 163 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AP000240.1-201ENST00000609910 452 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 AC011330.2-201ENST00000621680 635 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AC009039.2-201ENST00000624524 529 ntBASIC3.1□□□□□ -1.91
SFTPBP07988 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPBP07988 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPBP07988 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.1□□□□□ -1.91
SFTPBP07988 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
SFTPBP07988 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SFTPBP07988 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms