Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 RNU6-1155P-201ENST00000363554 107 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 SNORD116.1-201ENST00000365628 92 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 MIR135A2-201ENST00000384854 100 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 MIR134-201ENST00000385258 73 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL136310.1-201ENST00000404926 654 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 VN1R51P-201ENST00000411675 945 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC109780.2-201ENST00000413467 845 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 MRPL50P2-201ENST00000416821 482 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 RPL36AP36-201ENST00000418616 301 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 RPS3AP37-201ENST00000419176 745 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 BX842559.1-201ENST00000419615 532 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSPE1P1-201ENST00000421494 318 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL050321.1-201ENST00000432363 400 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSFY7P-201ENST00000432672 318 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSFY8P-201ENST00000437934 318 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC122718.1-201ENST00000439448 744 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL589880.1-201ENST00000448271 287 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSFY5P-201ENST00000453726 309 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 FAM133DP-201ENST00000464802 691 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC025518.1-201ENST00000479856 347 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC098799.2-201ENST00000509466 868 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 XKRY-201ENST00000510392 1100 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC022861.1-201ENST00000522981 663 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 HSPA8P13-201ENST00000523715 472 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 OR5G4P-201ENST00000525251 760 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 CR383656.7-201ENST00000548164 174 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AADACP1-206ENST00000561502 1193 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 COX6CP3-201ENST00000580869 223 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 VN1R78P-201ENST00000597393 564 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 BNIP3P26-201ENST00000600827 554 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AL390240.1-201ENST00000612950 384 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC103798.2-201ENST00000624292 632 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC127502.3-201ENST00000636170 1206 ntBASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1P01909 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 NACA3P-201ENST00000359690 648 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RNU6-560P-201ENST00000364007 108 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RNU6-413P-201ENST00000384115 107 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RNU6-1122P-201ENST00000384449 107 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 Y_RNA.548-201ENST00000384656 105 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 PTMAP2-201ENST00000397627 327 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 ERHP2-201ENST00000402323 299 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL590004.2-201ENST00000404787 371 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 U3.42-201ENST00000408746 214 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RNU4-65P-201ENST00000410473 140 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL592310.1-201ENST00000414330 671 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 HMGN2P31-201ENST00000432430 273 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RAC1P7-201ENST00000445367 377 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC005410.1-202ENST00000460347 485 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RPS23P3-201ENST00000470993 430 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 RPL7P38-201ENST00000488396 739 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC093677.1-201ENST00000514414 678 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms