Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ALDH1A1P00352 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.18□□□□□ -1.42
ALDH1A1P00352 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.18□□□□□ -1.42
ALDH1A1P00352 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 Y_RNA.54-201ENST00000362766 105 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 Y_RNA.277-201ENST00000364754 102 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 BX276092.3-201ENST00000424182 230 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC073264.2-201ENST00000448886 166 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 RN7SL354P-201ENST00000469282 294 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC087385.1-201ENST00000475062 312 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 RNU2-69P-201ENST00000516061 100 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 RNU6-1278P-201ENST00000516130 107 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 RNU7-4P-201ENST00000516961 62 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 RANP3-201ENST00000530970 276 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 AP002392.1-201ENST00000537692 208 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AP006289.1-201ENST00000538089 277 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 PARP1P2-201ENST00000556806 195 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 VN1R84P-201ENST00000593697 235 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC008162.1-201ENST00000604718 254 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AL451044.1-201ENST00000604867 238 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AL670379.4-201ENST00000605279 254 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 AC002044.1-201ENST00000606707 158 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ALDH1A1P00352 MAPK10-263ENST00000641052 4307 ntBASIC6.17□□□□□ -1.42
ALDH1A1P00352 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ALDH1A1P00352 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AL078621.3-201ENST00000623707 2042 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 RNU6-393P-201ENST00000384475 107 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 RPL11P3-201ENST00000395256 523 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC108471.1-201ENST00000513977 287 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 RNU6-346P-201ENST00000516288 111 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC022559.1-201ENST00000520905 205 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 ATP5J2P6-201ENST00000565203 266 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC073657.2-201ENST00000605661 303 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 AC004158.1-201ENST00000564508 4319 ntBASIC6.16□□□□□ -1.42
ALDH1A1P00352 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ALDH1A1P00352 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ALDH1A1P00352 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 AC011504.1-201ENST00000623331 4103 ntBASIC6.15□□□□□ -1.42
ALDH1A1P00352 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
ALDH1A1P00352 AC011978.2-201ENST00000569835 2054 ntBASIC6.15□□□□□ -1.42
ALDH1A1P00352 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 RNA5SP455-201ENST00000365190 119 ntBASIC6.15□□□□□ -1.42
ALDH1A1P00352 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ALDH1A1P00352 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms