Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC072039.1-201ENST00000477611 581 ntBASIC4.08□□□□□ -1.76
CUX2O14529 AL163540.1-201ENST00000485382 386 ntBASIC4.08□□□□□ -1.76
CUX2O14529 RPL30P11-201ENST00000495304 339 ntBASIC4.08□□□□□ -1.76
CUX2O14529 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.08□□□□□ -1.76
CUX2O14529 AC006116.7-201ENST00000590141 756 ntBASIC4.08□□□□□ -1.76
CUX2O14529 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.08□□□□□ -1.76
CUX2O14529 AL360085.1-201ENST00000604713 532 ntBASIC4.08□□□□□ -1.76
CUX2O14529 CRYM-AS1-204ENST00000637983 556 ntBASIC4.08□□□□□ -1.76
CUX2O14529 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CUX2O14529 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CUX2O14529 MAPK10-322ENST00000641485 4530 ntBASIC4.07□□□□□ -1.76
CUX2O14529 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CUX2O14529 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.07□□□□□ -1.76
CUX2O14529 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.07□□□□□ -1.76
CUX2O14529 RNA5SP129-201ENST00000410276 118 ntBASIC4.07□□□□□ -1.76
CUX2O14529 RPS15AP12-201ENST00000419498 388 ntBASIC4.07□□□□□ -1.76
CUX2O14529 SDCBPP3-201ENST00000419629 891 ntBASIC4.07□□□□□ -1.76
CUX2O14529 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.07□□□□□ -1.76
CUX2O14529 RPS7P5-201ENST00000441482 581 ntBASIC4.07□□□□□ -1.76
CUX2O14529 AL591719.1-201ENST00000444669 744 ntBASIC4.07□□□□□ -1.76
CUX2O14529 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.07□□□□□ -1.76
CUX2O14529 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.07□□□□□ -1.76
CUX2O14529 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.07□□□□□ -1.76
CUX2O14529 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.07□□□□□ -1.76
CUX2O14529 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.07□□□□□ -1.76
CUX2O14529 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.07□□□□□ -1.76
CUX2O14529 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.07□□□□□ -1.76
CUX2O14529 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.07□□□□□ -1.76
CUX2O14529 AC011374.2-201ENST00000607135 526 ntBASIC4.07□□□□□ -1.76
CUX2O14529 MIR219B-201ENST00000637023 88 ntBASIC4.07□□□□□ -1.76
CUX2O14529 AC069528.2-201ENST00000624849 1991 ntBASIC4.07□□□□□ -1.76
CUX2O14529 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CUX2O14529 AC009487.4-201ENST00000624969 3585 ntBASIC4.06□□□□□ -1.76
CUX2O14529 HNRNPDP2-201ENST00000406475 478 ntBASIC4.06□□□□□ -1.76
CUX2O14529 UBE2V1P11-201ENST00000411559 285 ntBASIC4.06□□□□□ -1.76
CUX2O14529 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CUX2O14529 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.06□□□□□ -1.76
CUX2O14529 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CUX2O14529 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.06□□□□□ -1.76
CUX2O14529 MTATP6P22-201ENST00000507369 598 ntBASIC4.06□□□□□ -1.76
CUX2O14529 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.06□□□□□ -1.76
CUX2O14529 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.06□□□□□ -1.76
CUX2O14529 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CUX2O14529 AP005901.5-201ENST00000545779 1796 ntBASIC4.05□□□□□ -1.76
CUX2O14529 RN7SKP140-201ENST00000411196 284 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AP000275.1-201ENST00000411943 390 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC104389.3-201ENST00000445629 235 ntBASIC4.05□□□□□ -1.76
CUX2O14529 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.05□□□□□ -1.76
CUX2O14529 MTND2P30-201ENST00000456663 382 ntBASIC4.05□□□□□ -1.76
CUX2O14529 RPL9P33-201ENST00000484311 566 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.05□□□□□ -1.76
CUX2O14529 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 RNU6-1102P-201ENST00000516149 96 ntBASIC4.05□□□□□ -1.76
CUX2O14529 CKS1BP7-201ENST00000522230 235 ntBASIC4.05□□□□□ -1.76
CUX2O14529 OR4A45P-201ENST00000529954 901 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 AK6P1-201ENST00000540219 478 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 MIR4458-201ENST00000578872 75 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AL671309.1-201ENST00000603750 544 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
CUX2O14529 U6.107-201ENST00000637108 79 ntBASIC4.05□□□□□ -1.76
CUX2O14529 MTND5P11-201ENST00000511037 1812 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.05□□□□□ -1.76
CUX2O14529 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CUX2O14529 SNORD114-26-201ENST00000363543 72 ntBASIC4.05□□□□□ -1.76
CUX2O14529 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CUX2O14529 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.05□□□□□ -1.76
CUX2O14529 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.05□□□□□ -1.76
CUX2O14529 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.05□□□□□ -1.76
CUX2O14529 SNORA76.2-201ENST00000517095 137 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC093331.1-201ENST00000521474 169 ntBASIC4.05□□□□□ -1.76
CUX2O14529 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.05□□□□□ -1.76
CUX2O14529 AC024595.1-201ENST00000623088 387 ntBASIC4.05□□□□□ -1.76
CUX2O14529 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CUX2O14529 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.05□□□□□ -1.76
CUX2O14529 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CUX2O14529 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUX2O14529 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUX2O14529 RNA5SP27-201ENST00000363839 119 ntBASIC4.04□□□□□ -1.76
CUX2O14529 RNA5SP210-201ENST00000391034 120 ntBASIC4.04□□□□□ -1.76
CUX2O14529 MTATP6P31-201ENST00000406985 692 ntBASIC4.04□□□□□ -1.76
CUX2O14529 MTATP6P11-201ENST00000428071 670 ntBASIC4.04□□□□□ -1.76
CUX2O14529 AL353718.1-201ENST00000451028 517 ntBASIC4.04□□□□□ -1.76
CUX2O14529 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.04□□□□□ -1.76
CUX2O14529 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.04□□□□□ -1.76
CUX2O14529 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.04□□□□□ -1.76
CUX2O14529 AC069304.3-201ENST00000603938 1084 ntBASIC4.04□□□□□ -1.76
CUX2O14529 AC009452.1-201ENST00000640823 606 ntBASIC4.04□□□□□ -1.76
CUX2O14529 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CUX2O14529 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CUX2O14529 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 PNPT1P2-201ENST00000456768 2050 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AL049737.1-201ENST00000413920 1403 ntBASIC4.03□□□□□ -1.76
CUX2O14529 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms