Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL049641.1-201ENST00000441055 1948 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RNU6-343P-201ENST00000364709 104 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RNU1-13P-201ENST00000384499 162 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 SNORA70C-201ENST00000384538 135 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RNA5SP80-201ENST00000410475 111 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RN7SKP220-201ENST00000410611 288 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC069157.1-201ENST00000421749 137 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 BRWD1P3-201ENST00000428816 390 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 SETP8-201ENST00000435341 628 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL714022.1-201ENST00000439897 151 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RPL23AP76-201ENST00000441860 458 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 MTND2P24-201ENST00000453434 806 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC011979.1-201ENST00000472300 483 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC116337.2-201ENST00000477662 156 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 FAM172BP-201ENST00000487497 1089 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC093663.1-201ENST00000497190 394 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC098799.1-201ENST00000504752 800 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC118282.1-201ENST00000506408 765 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC008837.2-201ENST00000513076 418 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RNY4P37-201ENST00000516225 96 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 C1GALT1P3-201ENST00000522049 819 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC010653.1-201ENST00000571108 881 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC091057.2-201ENST00000602594 792 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 BBIP1P1-201ENST00000602999 279 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC104785.1-201ENST00000603220 588 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC004852.3-201ENST00000614131 326 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 SNORD39.4-201ENST00000620099 78 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL161637.1-201ENST00000622380 412 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC002064.3-201ENST00000623448 346 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AC013437.2-201ENST00000639587 677 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 LINC02211-204ENST00000642024 1070 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 AL390862.1-201ENST00000635467 1469 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 CR383658.2-201ENST00000547576 1525 ntBASIC2.37□□□□□ -2.03
SMKR1H3BMG3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SMKR1H3BMG3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC108206.1-201ENST00000570186 4159 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 RNU6-560P-201ENST00000364007 108 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC007066.1-201ENST00000392902 381 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 RPL5P18-201ENST00000406671 891 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 Z85995.1-201ENST00000415547 335 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC008850.1-201ENST00000427546 362 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC002381.1-201ENST00000447049 280 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 RPL30P9-201ENST00000465586 330 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 RPS29P22-201ENST00000472363 168 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC104982.1-201ENST00000478775 574 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 HIGD1AP5-201ENST00000529959 259 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 OR6C7P-201ENST00000547875 934 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AL353997.4-201ENST00000586196 166 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC010591.1-201ENST00000603941 649 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC024941.1-201ENST00000612250 334 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 PART1_2.1-201ENST00000612397 250 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC073308.1-201ENST00000623696 305 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms