Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 NEK4P1-201ENST00000433383 879 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 CALM1P1-201ENST00000442082 433 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC140076.1-201ENST00000449897 361 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 RN7SL558P-201ENST00000497468 299 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC100870.1-201ENST00000522035 505 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 DEFB108D-201ENST00000527787 222 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AL161912.2-201ENST00000565707 3007 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 MIR4293-201ENST00000584305 78 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC008752.3-201ENST00000588113 712 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 FER-210ENST00000628534 558 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AC010266.2-201ENST00000564741 3255 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC116096.1-201ENST00000566804 2314 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 MIR331-201ENST00000362302 94 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 Y_RNA.303-201ENST00000364998 94 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 MIR135A2-201ENST00000384854 100 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 MIR558-201ENST00000384920 94 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RPL21P67-201ENST00000402896 478 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC096664.2-201ENST00000411843 406 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 JKAMPP1-201ENST00000413804 919 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RN7SL429P-201ENST00000479090 223 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RN7SL489P-201ENST00000486185 223 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RN7SL327P-201ENST00000488659 223 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC093278.1-201ENST00000494700 600 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC069439.1-201ENST00000494739 167 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC068305.1-201ENST00000497406 726 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RNU6-1281P-201ENST00000516223 105 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RNU2-10P-201ENST00000516375 211 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 HMGN1P28-201ENST00000521340 364 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 OR5BN1P-201ENST00000532955 829 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC090616.5-202ENST00000582111 297 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC098848.2-201ENST00000588023 330 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 RN7SL853P-201ENST00000617250 223 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AL034408.1-202ENST00000636088 415 ntBASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC85CA6NKD9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC85CA6NKD9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC85CA6NKD9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC85CA6NKD9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 SNORD56.2-201ENST00000363242 71 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 Y_RNA.295-201ENST00000364918 102 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU6-606P-201ENST00000384721 111 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU4-65P-201ENST00000410473 140 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AL590399.2-201ENST00000427536 309 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 MED13P1-201ENST00000428342 171 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RPS15AP9-201ENST00000439856 381 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 DPPA3P1-201ENST00000448050 469 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU6-261P-201ENST00000459506 102 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms