Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC011374.2-201ENST00000607135 526 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC112503.2-201ENST00000609005 552 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC073968.1-201ENST00000618594 637 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AL356118.1-201ENST00000635272 1078 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC068620.4-201ENST00000636730 1182 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORA71.3-201ENST00000362582 128 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU1-105P-201ENST00000363470 161 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU1-112P-201ENST00000364401 164 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORA68.1-201ENST00000364537 132 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RPS3AP25-201ENST00000411660 793 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 MTCO3P30-201ENST00000426425 670 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 COX6CP12-201ENST00000446748 202 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 WASF1P1-201ENST00000447560 1131 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC093663.2-201ENST00000484625 313 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 RPS27P27-201ENST00000498779 255 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC008427.1-201ENST00000503102 655 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC026427.2-201ENST00000506228 536 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC107222.1-201ENST00000510899 637 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORA31.13-201ENST00000516624 135 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 COX6CP5-201ENST00000527162 228 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC068339.2-201ENST00000534395 618 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC074029.2-201ENST00000551045 634 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 CYCSP39-201ENST00000565821 309 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 MIMT1-201ENST00000597105 1050 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AC012669.1-201ENST00000603209 283 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 AL356280.1-201ENST00000603614 379 ntBASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
TRAV13-1A0A0B4J241 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC007336.1-201ENST00000576365 3828 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORD62.1-201ENST00000362541 86 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU6-730P-201ENST00000383954 104 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORA9-201ENST00000384215 133 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 U3.20-201ENST00000390909 217 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 UBA52P6-201ENST00000399822 382 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 FABP12P1-201ENST00000401911 322 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AL512504.1-201ENST00000415494 778 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 RPLP0P7-201ENST00000416050 667 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC008280.1-201ENST00000418851 412 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 ARL2BPP3-201ENST00000421226 480 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 MTCO2P17-201ENST00000424336 677 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AL139132.1-201ENST00000431587 344 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC098826.1-201ENST00000433943 471 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 ARPC3P1-201ENST00000437218 533 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AL513328.1-201ENST00000446460 224 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC004022.1-201ENST00000447766 1066 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AL358232.1-201ENST00000448030 501 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 BX248409.1-201ENST00000455497 255 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 NDUFB4P2-201ENST00000509515 391 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 HIGD1AP13-201ENST00000509878 289 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 HMGB1P47-201ENST00000511281 589 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC109329.2-201ENST00000519658 482 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 RPL23AP92-201ENST00000603609 255 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC004775.1-201ENST00000607389 753 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AP004247.3-201ENST00000608682 624 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC009090.3-201ENST00000616553 565 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 MIR6075-201ENST00000620782 95 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC012321.1-201ENST00000561622 1588 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC046144.1-201ENST00000478559 1853 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 AC022336.2-201ENST00000568966 2538 ntBASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
TRAV13-1A0A0B4J241 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV13-1A0A0B4J241 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms