Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AL359976.1-201ENST00000418655 3528 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC005725.1-201ENST00000577346 2607 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 SNORD63-201ENST00000384262 68 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 GLULP6-201ENST00000399502 913 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AL121835.1-201ENST00000404250 354 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RNU2-21P-201ENST00000410368 188 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 GAPDHP58-201ENST00000438477 1006 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RPL26P6-201ENST00000440913 438 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 TPT1P12-201ENST00000448968 492 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RN7SKP210-201ENST00000459176 261 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RPL37P6-202ENST00000464216 403 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC114982.1-201ENST00000469402 321 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RPL30P1-201ENST00000488676 339 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RNY3P16-201ENST00000516338 101 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 CASP1P1-201ENST00000526345 212 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 SNRPGP16-201ENST00000533275 226 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AL358913.1-201ENST00000554342 121 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 MIR4659A-201ENST00000580269 81 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 PRPF19P1-201ENST00000584766 898 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC037487.3-201ENST00000606668 112 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 MIR8076-201ENST00000611401 83 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC011476.5-201ENST00000615594 130 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 AC008758.3-201ENST00000507003 1829 ntBASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PCDHB3Q9Y5E6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.82-201ENST00000363000 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.92-201ENST00000363043 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.235-201ENST00000364412 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.306-201ENST00000365015 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.312-201ENST00000365089 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.322-201ENST00000365151 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 GNG5P2-201ENST00000372054 207 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.400-201ENST00000383963 111 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 SNORA12.2-201ENST00000391040 156 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 SNORD78.2-201ENST00000391076 69 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AL353621.1-201ENST00000418219 243 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AC099677.1-201ENST00000420575 175 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 MTCO1P39-201ENST00000426148 480 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 BX323845.3-201ENST00000428215 527 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.650-201ENST00000459002 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RN7SL714P-201ENST00000487050 298 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RPL12P30-201ENST00000488389 499 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AC106800.3-201ENST00000511389 308 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RNU5F-8P-201ENST00000515941 111 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.777-201ENST00000516982 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RPL23AP87-202ENST00000573039 466 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 MIR4308-201ENST00000580634 81 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 RN7SL475P-201ENST00000583379 298 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 MIR548AC-201ENST00000585049 88 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.771-201ENST00000598668 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 FAM27E2-201ENST00000619668 403 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.789-201ENST00000622480 102 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 AC097461.1-201ENST00000568928 2821 ntBASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB3Q9Y5E6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms