Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 C1DP2-201ENST00000418167 426 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 GLRXP1-201ENST00000423261 334 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RPEP2-201ENST00000432149 701 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 MTND6P13-201ENST00000443510 523 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 VN1R34P-201ENST00000447387 883 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC104073.1-201ENST00000451988 151 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RPL7P15-201ENST00000461190 712 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RN7SL542P-201ENST00000467147 294 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 MTAPP1-201ENST00000489154 819 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RNF138P1-201ENST00000502765 546 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RNU6-430P-201ENST00000517078 107 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 RNU6-1003P-201ENST00000517099 105 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AP003467.2-201ENST00000520175 319 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC022790.1-201ENST00000522872 204 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 PHBP17-201ENST00000528576 541 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 MIR3913-1-201ENST00000577744 102 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AP000860.1-201ENST00000605250 559 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC091965.4-201ENST00000607691 587 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC090517.2-201ENST00000614966 680 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AC116667.1-201ENST00000604855 2072 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 FARSBP1-201ENST00000435808 1778 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 AL139811.1-201ENST00000424779 2299 ntBASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 SAGE4P-201ENST00000442271 3381 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RNU1-15P-201ENST00000353977 144 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 Y_RNA.248-201ENST00000364501 109 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 SNORD66.1-201ENST00000391230 76 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RNU2-21P-201ENST00000410368 188 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AL139415.2-201ENST00000431968 163 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RPL22P17-201ENST00000438729 315 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AP000542.1-201ENST00000448473 371 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 FGF7P6-202ENST00000451282 293 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AP001025.2-201ENST00000490908 477 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC034222.1-201ENST00000494052 532 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC068305.1-201ENST00000497406 726 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC110792.2-201ENST00000510278 224 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RNU6-314P-201ENST00000516574 104 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RN7SL703P-201ENST00000578485 302 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 MIR5685-201ENST00000579080 79 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AL161729.4-201ENST00000604650 476 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AP002360.4-201ENST00000606980 481 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 U6.42-201ENST00000618440 107 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 CR381653.2-201ENST00000624041 768 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 AC097714.1-201ENST00000511272 1647 ntBASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX2IPQ9Y2D8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.4□□□□□ -1.7
SSX2IPQ9Y2D8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 MIR200C-201ENST00000384980 68 ntBASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 RPL17P50-201ENST00000396131 546 ntBASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 BTF3P7-201ENST00000407097 488 ntBASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 USP9YP18-201ENST00000425912 695 ntBASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 RPS29P7-201ENST00000439662 171 ntBASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.4□□□□□ -1.71
SSX2IPQ9Y2D8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms