Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AP001350.1-201ENST00000601906 1524 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-251P-201ENST00000363235 104 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 RNU4-92P-201ENST00000363783 136 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 SUGT1P1-201ENST00000379514 476 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AL121978.1-201ENST00000402778 359 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 RPS3AP9-201ENST00000417027 792 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 GLRXP1-201ENST00000423261 334 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 Z77249.1-201ENST00000444622 1175 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC007327.1-201ENST00000447461 264 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC140076.1-201ENST00000449897 361 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 RFC5P1-201ENST00000454419 874 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AP001486.1-201ENST00000463339 476 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 BOLA3P3-201ENST00000505182 232 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 MTCYBP16-201ENST00000509187 1129 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 MTCYBP37-201ENST00000510642 1133 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC008885.1-201ENST00000514930 301 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AP001189.2-201ENST00000527320 189 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 MTATP6P24-201ENST00000576835 677 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 LARP7P3-201ENST00000579888 337 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC092106.3-201ENST00000611308 722 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AL390240.1-201ENST00000612950 384 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 ATP5A1P2-202ENST00000616464 443 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
APOBEC3BQ9UH17 DBF4P1-201ENST00000412976 1892 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC011978.2-201ENST00000569835 2054 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 MIR649-201ENST00000384843 97 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AL590084.1-201ENST00000407885 387 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNA5SP129-201ENST00000410276 118 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNA5SP80-201ENST00000410475 111 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC096632.1-201ENST00000427395 310 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 FGF7P5-201ENST00000441829 291 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC004022.1-201ENST00000447766 1066 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 SNORA59A-201ENST00000459326 152 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC080014.1-201ENST00000496877 1201 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 HIGD1AP3-201ENST00000515857 278 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-1225P-201ENST00000516336 65 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RN7SKP31-201ENST00000516354 278 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AP001636.2-201ENST00000525517 696 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 MTND4P33-201ENST00000556706 766 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC234772.3-201ENST00000602277 528 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 PRELID3BP8-201ENST00000604148 295 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC013244.3-201ENST00000605614 388 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC093732.2-201ENST00000607950 274 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC063944.3-201ENST00000609969 533 ntBASIC3.09□□□□□ -1.91
APOBEC3BQ9UH17 AC100793.4-201ENST00000613683 429 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms