Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPL37P6-202ENST00000464216 403 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 MTND5P13-201ENST00000513046 1079 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 RN7SKP13-201ENST00000515933 244 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 RNA5SP208-201ENST00000516156 78 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 HIGD1AP10-201ENST00000527837 282 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AL121576.1-201ENST00000556055 276 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC008507.1-201ENST00000587506 734 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC010591.1-201ENST00000603941 649 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC090186.1-201ENST00000605991 572 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AL158063.1-201ENST00000615349 536 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 U7.8-201ENST00000619968 63 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 NUP58P1-201ENST00000502546 1738 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 CR383658.2-201ENST00000547576 1525 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 RPS4XP5-202ENST00000449995 1334 ntBASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDAC6Q9UBN7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 RNU6-433P-201ENST00000363216 104 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 MIR483-201ENST00000385070 76 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 HLFP1-201ENST00000402375 499 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 MIR1305-201ENST00000408300 86 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 TPMTP3-201ENST00000411928 735 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 NPM1P11-201ENST00000417106 855 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 MUPP-201ENST00000438111 566 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 EEF1E1P1-201ENST00000446998 430 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 CFTRP1-201ENST00000456646 183 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 OR5H5P-201ENST00000503164 928 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 POU5F1P7-201ENST00000508759 541 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC010625.1-201ENST00000511296 403 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 SNORA70.24-201ENST00000517233 118 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 COX6CP8-201ENST00000522620 226 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 LLPHP1-201ENST00000603571 367 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL358072.1-201ENST00000604156 575 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC025588.3-201ENST00000604182 274 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC245008.1-201ENST00000608123 476 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC090116.1-201ENST00000615679 446 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC073968.1-201ENST00000618594 637 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AL445264.1-201ENST00000621719 171 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AC244205.2-202ENST00000635781 342 ntBASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDAC6Q9UBN7 AP001486.2-201ENST00000561652 5113 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC073073.2-201ENST00000609827 2578 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 RNU6-660P-201ENST00000364566 109 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 RNU4-91P-201ENST00000364778 135 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 MIR490-201ENST00000384865 128 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 MT-TC-201ENST00000387405 66 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 SNORA26.8-201ENST00000391306 124 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 DHFRP6-201ENST00000401776 268 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 RPL7P8-201ENST00000411964 730 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 GLRXP1-201ENST00000423261 334 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC073063.1-201ENST00000434352 607 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms