Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK12Q9NYV4 ABI1P1-201ENST00000603375 1120 ntBASIC2.89□□□□□ -1.95
CDK12Q9NYV4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK12Q9NYV4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 BTBD10P2-201ENST00000404779 676 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 RAD23BP2-201ENST00000416003 1207 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 EI24P1-201ENST00000416584 867 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 RN7SKP234-201ENST00000517173 224 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 HMGB1P1-201ENST00000522557 636 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 AC002984.1-201ENST00000591692 448 ntBASIC2.88□□□□□ -1.95
CDK12Q9NYV4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDK12Q9NYV4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AL592437.2-201ENST00000421655 2434 ntBASIC2.87□□□□□ -1.95
CDK12Q9NYV4 RNU6-707P-201ENST00000364647 95 ntBASIC2.87□□□□□ -1.95
CDK12Q9NYV4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CDK12Q9NYV4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.87□□□□□ -1.95
CDK12Q9NYV4 C2orf27A-204ENST00000623058 969 ntBASIC2.87□□□□□ -1.95
CDK12Q9NYV4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDK12Q9NYV4 U3.37-201ENST00000408528 213 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AC099336.2-201ENST00000422457 254 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AL118520.1-201ENST00000450770 291 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 RPS26P21-201ENST00000475397 348 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AC087241.2-201ENST00000535801 324 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AP001542.2-201ENST00000593141 364 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 AL159169.2-201ENST00000610061 1269 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 FAM35CP-201ENST00000554755 2470 ntBASIC2.86□□□□□ -1.95
CDK12Q9NYV4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 RNA5SP190-201ENST00000365222 118 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 RPL5P19-201ENST00000404228 893 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AC022431.1-201ENST00000450941 438 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 snoZ278.1-201ENST00000517059 112 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AC025881.1-201ENST00000518851 512 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AC010872.1-201ENST00000624225 675 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 AL512283.1-201ENST00000606756 1384 ntBASIC2.85□□□□□ -1.95
CDK12Q9NYV4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 HMGB3P10-201ENST00000434734 572 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 PTGES3P5-201ENST00000455109 434 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 RN7SKP34-201ENST00000516142 244 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 AL354943.1-201ENST00000572103 781 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 CU459211.1-201ENST00000635667 749 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 AC121333.1-201ENST00000567488 2709 ntBASIC2.84□□□□□ -1.95
CDK12Q9NYV4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.84□□□□□ -1.95
CDK12Q9NYV4 SEPT7P7-201ENST00000420492 1301 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 RNU6-392P-201ENST00000364926 101 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 RPS3AP4-201ENST00000555161 764 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC110588.1-201ENST00000559699 137 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.84□□□□□ -1.96
CDK12Q9NYV4 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 AC048347.1-201ENST00000624621 427 ntBASIC2.84□□□□□ -1.96
CDK12Q9NYV4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDK12Q9NYV4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDK12Q9NYV4 RNU6-1263P-201ENST00000384601 106 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 AC019129.1-201ENST00000403786 261 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.83□□□□□ -1.96
CDK12Q9NYV4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.83□□□□□ -1.96
CDK12Q9NYV4 AC009237.8-201ENST00000445492 379 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 AL121594.1-201ENST00000475906 575 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 MTND5P4-201ENST00000514978 288 ntBASIC2.83□□□□□ -1.96
CDK12Q9NYV4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDK12Q9NYV4 API5P2-201ENST00000397055 1498 ntBASIC2.82□□□□□ -1.96
CDK12Q9NYV4 CR382285.2-201ENST00000624662 1495 ntBASIC2.82□□□□□ -1.96
CDK12Q9NYV4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms