Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MTND1P31-201ENST00000449206 961 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC104472.2-201ENST00000469035 601 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AP001025.2-201ENST00000490908 477 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 MIR4277-201ENST00000578298 84 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AL137849.1-201ENST00000604767 169 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 MIR6868-201ENST00000611215 58 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 MIR6798-201ENST00000612887 67 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 MIR7151-201ENST00000617477 60 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC079597.1-201ENST00000624306 508 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 AC009039.2-201ENST00000624524 529 ntBASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHCHD3Q9NX63 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RNA5SP509-201ENST00000364577 119 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RNU6-744P-201ENST00000365557 107 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RNU6-1316P-201ENST00000384242 108 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RPS3AP24-201ENST00000407896 734 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 MIR320C1-201ENST00000408566 88 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AL139281.1-201ENST00000422120 335 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AL592447.1-201ENST00000447592 540 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RN7SL385P-201ENST00000468873 276 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 MIR2116-201ENST00000517221 80 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 HMGN1P28-201ENST00000521340 364 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 FAM60DP-201ENST00000524174 632 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 PSMB7P1-201ENST00000556349 514 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC136618.2-201ENST00000575091 400 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 OR4K8P-201ENST00000578842 1048 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC013244.3-201ENST00000605614 388 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 AC244258.1-201ENST00000637553 1071 ntBASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.44□□□□□ -1.86
CHCHD3Q9NX63 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AP000526.1-201ENST00000603308 1388 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 RNU6-1078P-201ENST00000364522 103 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 SNORA51.4-201ENST00000364993 124 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 RNU6-1207P-201ENST00000384343 107 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 SNORA1.3-201ENST00000384676 136 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 SSXP9-201ENST00000417503 292 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 USP9YP36-201ENST00000424581 829 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AC006989.1-201ENST00000427212 131 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 UBE2FP3-201ENST00000436366 524 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 UBE2V1P13-201ENST00000436983 439 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 COX6CP2-201ENST00000444980 225 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 EEF1E1P1-201ENST00000446998 430 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 MTCO1P27-201ENST00000448269 226 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AC084198.1-201ENST00000477747 402 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 RPS3AP50-201ENST00000487064 803 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 AC106872.3-201ENST00000495104 446 ntBASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.43□□□□□ -1.86
CHCHD3Q9NX63 RNA5SP179-201ENST00000517284 121 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms