Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PPP1R11P1-201ENST00000486095 376 ntBASIC8.28□□□□□ -1.08
RNF216Q9NWF9 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 ARF4P1-201ENST00000605447 541 ntBASIC8.28□□□□□ -1.08
RNF216Q9NWF9 AL022345.2-201ENST00000606307 135 ntBASIC8.28□□□□□ -1.08
RNF216Q9NWF9 U1.25-201ENST00000614085 162 ntBASIC8.28□□□□□ -1.08
RNF216Q9NWF9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF216Q9NWF9 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.27□□□□□ -1.08
RNF216Q9NWF9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
RNF216Q9NWF9 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
RNF216Q9NWF9 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.27□□□□□ -1.08
RNF216Q9NWF9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 Y_RNA.466-201ENST00000384294 113 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 MIR570-201ENST00000384917 97 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 PTMAP8-201ENST00000397729 342 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 NME1P1-201ENST00000420914 382 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 MTATP8P2-201ENST00000435212 202 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 AC009237.8-201ENST00000445492 379 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 RPS10P28-201ENST00000480396 498 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 RPL7AP30-201ENST00000482859 796 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 AL445187.1-201ENST00000502685 260 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 COX6CP16-201ENST00000603667 216 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 BX005214.3-202ENST00000619809 325 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 AL359263.1-201ENST00000441188 2796 ntBASIC8.27□□□□□ -1.09
RNF216Q9NWF9 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RNF216Q9NWF9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AC005614.1-201ENST00000598952 3653 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 RNA5SP396-201ENST00000364834 120 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 RNA5SP302-201ENST00000364896 100 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 Y_RNA.323-201ENST00000365157 109 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 MIR555-201ENST00000384987 96 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 MIR590-201ENST00000385008 97 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 MIR320B2-201ENST00000408479 138 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 RN7SL776P-201ENST00000493390 268 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 OR7E96P-201ENST00000530816 976 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 SSU72P6-201ENST00000532644 488 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 MIR1273F-201ENST00000580581 99 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 POLR3GP1-201ENST00000594073 261 ntBASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF216Q9NWF9 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 SNORD56.1-201ENST00000362913 68 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 SNORA18.3-201ENST00000384122 132 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 AL590762.2-201ENST00000395798 571 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 SNORA2C-201ENST00000408564 137 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 ANKRD54P1-201ENST00000433115 471 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 RNA5SP116-201ENST00000516132 98 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 NDUFA3P2-201ENST00000531434 232 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms