Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC022387.2-201ENST00000604050 448 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC079395.3-201ENST00000615161 484 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC024023.1-201ENST00000624530 922 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3BQ9H321 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 RNU6-1226P-201ENST00000384317 107 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 SNORD23.1-201ENST00000408212 104 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 RNA5SP21-201ENST00000410917 96 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 HMGB3P31-201ENST00000413333 595 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC022493.1-201ENST00000492984 337 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC118942.1-201ENST00000529674 1035 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 OR4R2P-201ENST00000530815 597 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 AL138976.2-201ENST00000563989 694 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 EIF5A2P1-201ENST00000564027 460 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.35□□□□□ -2.03
VCX3BQ9H321 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3BQ9H321 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 MTND4P1-201ENST00000457501 1466 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 RPL32P3-201ENST00000359025 275 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 HMGB3P2-201ENST00000411913 584 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 NPM1P11-201ENST00000417106 855 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC007560.1-201ENST00000426912 237 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 ARF4P4-201ENST00000439608 520 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AL358232.1-201ENST00000448030 501 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 RPS15AP27-201ENST00000449183 343 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC090515.1-201ENST00000465295 476 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC025588.3-201ENST00000604182 274 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 AL121917.1-203ENST00000605534 577 ntBASIC2.34□□□□□ -2.03
VCX3BQ9H321 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.34□□□□□ -2.03
VCX3BQ9H321 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.34□□□□□ -2.04
VCX3BQ9H321 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3BQ9H321 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 ZNF90P1-201ENST00000480493 1951 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3BQ9H321 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3BQ9H321 U3.20-201ENST00000390909 217 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 CYCSP45-201ENST00000402289 315 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 RNA5SP120-201ENST00000410900 112 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 SRIP2-201ENST00000428470 166 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 PSPHP1-201ENST00000450062 261 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC233982.1-201ENST00000451247 436 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC078814.3-201ENST00000553036 491 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC011260.1-201ENST00000578420 472 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VCX3BQ9H321 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 OR10AB1P-201ENST00000609613 938 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 MIR6820-201ENST00000611508 62 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 LINC00216-201ENST00000623548 1126 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 AP006248.3-201ENST00000623580 594 ntBASIC2.33□□□□□ -2.04
VCX3BQ9H321 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.33□□□□□ -2.04
VCX3BQ9H321 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 RNU6-173P-201ENST00000364215 104 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 RNU6-920P-201ENST00000410926 92 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AL356379.1-201ENST00000414105 126 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC091286.1-201ENST00000431233 461 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 HMGN2P31-201ENST00000432430 273 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms