Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 AC010287.1-201ENST00000566916 357 ntBASIC7.63□□□□□ -1.19
RNF39Q9H2S5 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 AC007256.1-201ENST00000392253 2765 ntBASIC7.63□□□□□ -1.19
RNF39Q9H2S5 RN7SKP23-201ENST00000625159 4301 ntBASIC7.63□□□□□ -1.19
RNF39Q9H2S5 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF39Q9H2S5 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 SNORA33-201ENST00000363664 130 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 RNU6-674P-201ENST00000363831 107 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 RNU1-140P-201ENST00000365040 165 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 RNA5SP152-201ENST00000365184 110 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 FTH1P15-201ENST00000406984 280 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 FAM183DP-201ENST00000421987 399 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 HMGB1P37-201ENST00000439613 609 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 AC005332.4-201ENST00000592752 579 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 AC010463.3-201ENST00000594077 500 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF39Q9H2S5 AC125257.1-201ENST00000560400 2930 ntBASIC7.62□□□□□ -1.19
RNF39Q9H2S5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 SAGE4P-201ENST00000442271 3381 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 RNU6-603P-201ENST00000411403 107 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 RPL7AP71-201ENST00000451120 739 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 GLRXP3-201ENST00000470810 321 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 AL451007.1-201ENST00000595491 289 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 MIR6885-201ENST00000612241 66 ntBASIC7.61□□□□□ -1.19
RNF39Q9H2S5 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF39Q9H2S5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AC012306.1-201ENST00000423267 114 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AKR1B10P1-201ENST00000425765 942 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 SDHCP3-201ENST00000445371 506 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 H2AFZP5-201ENST00000446960 382 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 RPL31P11-202ENST00000454082 372 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AC009567.2-201ENST00000502989 349 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 Y_RNA.705-201ENST00000516862 110 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 IGLC4-201ENST00000517690 248 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AC007751.1-201ENST00000529260 376 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AP006587.5-201ENST00000532033 739 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AL020997.2-201ENST00000602607 184 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 AC111186.1-201ENST00000604684 130 ntBASIC7.6□□□□□ -1.19
RNF39Q9H2S5 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF39Q9H2S5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms