Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AL356575.1-201ENST00000603008 283 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 DUXAP4-201ENST00000603046 613 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AP000787.2-201ENST00000604432 568 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 AP003122.6-201ENST00000623831 495 ntBASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.01□□□□□ -1.93
UPF3BQ9BZI7 MTND4P8-201ENST00000514997 1362 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC006378.2-201ENST00000623178 2476 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPF3BQ9BZI7 VTRNA1-1-201ENST00000363120 99 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 DEFA7P-201ENST00000382676 285 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 RNU6-482P-201ENST00000391068 107 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 RNA5SP56-201ENST00000410277 118 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC097499.1-201ENST00000444277 208 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AL445669.2-201ENST00000454425 421 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPF3BQ9BZI7 SNORA31.1-201ENST00000515993 133 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 SNORA31.5-201ENST00000516190 133 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 SNORA31.13-201ENST00000516624 135 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AP003385.6-201ENST00000531603 374 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 HSPE1P20-201ENST00000538133 289 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC091057.2-201ENST00000602594 792 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC009220.3-201ENST00000604318 586 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC079610.2-201ENST00000604818 690 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 MIR6817-201ENST00000615588 66 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC092650.2-201ENST00000619984 902 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC091046.2-201ENST00000620775 665 ntBASIC3□□□□□ -1.93
UPF3BQ9BZI7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
UPF3BQ9BZI7 ZNF734P-201ENST00000419494 1534 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 ZNF658B-202ENST00000615961 3375 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AL162578.1-201ENST00000406202 378 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 Z86062.1-201ENST00000406773 777 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 VTA1P1-201ENST00000414044 866 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 RAD23BP2-201ENST00000416003 1207 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AC008549.1-201ENST00000512900 643 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 MIR5092-201ENST00000583139 88 ntBASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
UPF3BQ9BZI7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 SNORA14A-201ENST00000364773 135 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 DSTNP4-201ENST00000399472 474 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AL139039.1-201ENST00000401900 692 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 SSXP9-201ENST00000417503 292 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC006548.1-201ENST00000427470 102 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 MTATP6P4-201ENST00000427725 675 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 UBE2V1P6-201ENST00000430840 422 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 snoU13.4-201ENST00000458916 104 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 GAPDHP39-201ENST00000481866 979 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AIG1P1-201ENST00000503376 148 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC096725.1-201ENST00000514266 313 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC015712.3-201ENST00000559380 164 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 CBX3P2-202ENST00000583365 535 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AL355812.1-201ENST00000603215 216 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC022387.2-201ENST00000604050 448 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 CR381572.1-201ENST00000625098 102 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms