Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AP000936.2-201ENST00000447151 681 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 Z99714.1-201ENST00000450463 807 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AL590639.1-201ENST00000456484 337 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC128713.1-201ENST00000471495 306 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 OR4A45P-201ENST00000529954 901 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC007954.1-201ENST00000554198 494 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC113368.1-201ENST00000603736 382 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPAP1Q9BWH6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC007336.1-201ENST00000576365 3828 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 RNU6-353P-201ENST00000364266 108 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 SNORA7.2-201ENST00000364446 145 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 RNU6-335P-201ENST00000364563 113 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 RNU6-619P-201ENST00000365146 108 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 XGY1-201ENST00000381172 446 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 MIR649-201ENST00000384843 97 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 MIR607-201ENST00000385241 96 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AP000567.1-201ENST00000406413 156 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 ZNF734P-201ENST00000419494 1534 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC234064.1-201ENST00000436312 247 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AL096829.2-201ENST00000446582 742 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 NECAP1P2-201ENST00000455668 727 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 NF1P3-201ENST00000457709 450 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC090525.1-201ENST00000479116 478 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 SNORA9.3-201ENST00000516383 129 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC006518.2-201ENST00000542513 940 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AC009097.3-201ENST00000563557 1018 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.31□□□□□ -1.88
RPAP1Q9BWH6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 OR1L1-202ENST00000373686 1083 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 RNU6-629P-201ENST00000384061 103 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 SAR1AP2-201ENST00000392696 594 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 RPL22P22-201ENST00000395439 379 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AL121972.1-201ENST00000402023 252 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 TOMM22P1-201ENST00000418578 312 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 FO393414.1-201ENST00000428697 1184 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 MUPP-201ENST00000438111 566 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 RPL23AP11-201ENST00000475260 469 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 YWHAEP4-201ENST00000505390 198 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 RN7SKP244-201ENST00000516513 307 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC234778.2-201ENST00000566241 354 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC078880.5-201ENST00000617845 421 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC068722.2-201ENST00000618734 544 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 CR381653.2-201ENST00000624041 768 ntBASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 AC243829.7-201ENST00000633081 225 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms