Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL031659.1-201ENST00000447075 539 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 RPS27P27-201ENST00000498779 255 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC091826.1-201ENST00000514065 313 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC096725.1-201ENST00000514266 313 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 OR5BN1P-201ENST00000532955 829 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC087241.2-201ENST00000535801 324 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC125494.3-201ENST00000602759 455 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC018926.3-201ENST00000618841 406 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 MTND2P41-201ENST00000637599 773 ntBASIC1.56□□□□□ -2.16
LIMD2Q9BT23 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.56□□□□□ -2.16
LIMD2Q9BT23 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 RNU6-730P-201ENST00000383954 104 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 MIR142-201ENST00000384835 87 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 UBA52P6-201ENST00000399822 382 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 MTND4LP20-201ENST00000402379 270 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 U3.40-201ENST00000408706 208 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 VTA1P1-201ENST00000414044 866 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL356320.2-201ENST00000417263 507 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 FNDC3CP-201ENST00000420795 1155 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL365496.1-201ENST00000426885 215 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL590762.3-201ENST00000436372 640 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC112653.1-201ENST00000443851 386 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 OR6K5P-201ENST00000447050 945 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC092685.1-201ENST00000447960 1243 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 DPPA3P1-201ENST00000448050 469 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 RPL23AP31-201ENST00000456160 467 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 NAP1L1P3-201ENST00000462291 880 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SETP12-201ENST00000514068 805 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 PRELID3BP4-201ENST00000515476 571 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SNORA74D-201ENST00000516404 141 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SNORA26.10-201ENST00000516427 141 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SNORA31.13-201ENST00000516624 135 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 NDUFS5P6-201ENST00000529136 295 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL133271.1-201ENST00000538229 291 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AMZ2P1-203ENST00000565833 850 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 ELOCP29-201ENST00000588193 334 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC007619.2-201ENST00000605743 379 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC005046.1-201ENST00000608515 625 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC013468.1-201ENST00000608680 598 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL137847.3-201ENST00000611521 109 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 MIR6840-201ENST00000611937 71 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL392048.1-201ENST00000613946 534 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL442067.2-201ENST00000614033 363 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC245884.12-201ENST00000615364 59 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC068880.5-201ENST00000624331 290 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC092608.2-201ENST00000624427 218 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC104446.1-201ENST00000613728 1321 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC005336.3-201ENST00000623833 2679 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AP000526.1-201ENST00000603308 1388 ntBASIC1.55□□□□□ -2.16
LIMD2Q9BT23 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.55□□□□□ -2.16
LIMD2Q9BT23 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 MIRLET7G-201ENST00000362280 84 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 SNORD114-30-201ENST00000364448 72 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 RNU4-52P-201ENST00000384209 138 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 MIR524-201ENST00000385242 87 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 RNU6-821P-201ENST00000390995 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms