Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX2Q99626 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 COL6A4P2-205ENST00000509855 506 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC121161.1-201ENST00000510606 652 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.8□□□□□ -1.96
CDX2Q99626 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.8□□□□□ -1.96
CDX2Q99626 HPRT1P3-201ENST00000539521 576 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 MIR4498-201ENST00000577599 66 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC008507.1-201ENST00000587506 734 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX2Q99626 AC133794.1-201ENST00000602731 914 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AL451074.6-201ENST00000608512 729 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC006023.2-201ENST00000609916 167 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX2Q99626 AL109659.3-201ENST00000624985 950 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC091948.2-201ENST00000636510 279 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.8□□□□□ -1.96
CDX2Q99626 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 AL136164.4-201ENST00000625013 2135 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX2Q99626 MTND5P28-201ENST00000438005 1594 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX2Q99626 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX2Q99626 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX2Q99626 AL512283.1-201ENST00000606756 1384 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC025263.3-201ENST00000622965 1396 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RNU1-75P-201ENST00000347264 129 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RNU1-73P-201ENST00000383971 164 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RNU6-77P-201ENST00000410554 91 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RNA5SP31-201ENST00000411144 127 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RPS7P13-201ENST00000413955 498 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX2Q99626 PAICSP7-201ENST00000419829 962 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AL121882.1-201ENST00000422893 417 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX2Q99626 AL929288.2-201ENST00000446368 407 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 ST13P20-201ENST00000447996 1065 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX2Q99626 RPL21P104-201ENST00000464143 478 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RN7SL442P-201ENST00000473804 320 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 TRBV1-201ENST00000476502 284 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.79□□□□□ -1.96
CDX2Q99626 AC118282.1-201ENST00000506408 765 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 RNU6-416P-201ENST00000516265 103 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 IGJP1-201ENST00000522682 475 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 OSBPL9P3-201ENST00000534523 595 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC079148.1-201ENST00000565944 819 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 MTCYBP28-201ENST00000566728 1132 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC124283.4-201ENST00000581815 456 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AL512506.1-201ENST00000613918 449 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 MIR4496-201ENST00000635896 61 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC002543.1-201ENST00000299783 1954 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 AC004925.1-201ENST00000624256 2706 ntBASIC2.79□□□□□ -1.96
CDX2Q99626 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX2Q99626 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDX2Q99626 AL359893.1-201ENST00000447628 1580 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 MAPK10-362ENST00000641864 4484 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX2Q99626 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX2Q99626 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.78□□□□□ -1.96
CDX2Q99626 DSTNP4-201ENST00000399472 474 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 PTGES3P2-201ENST00000407942 482 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC009237.2-201ENST00000421358 284 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX2Q99626 GLRXP1-201ENST00000423261 334 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 RPL7P46-201ENST00000425129 740 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 DPPA2P1-201ENST00000428060 556 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX2Q99626 TRIM60P18-201ENST00000441518 828 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC004865.1-201ENST00000442276 1003 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC096638.1-201ENST00000444678 216 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AL590399.6-201ENST00000446396 307 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 SSXP4-201ENST00000451349 245 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX2Q99626 RPS15AP1-201ENST00000457423 391 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX2Q99626 RPL7P5-201ENST00000471472 736 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX2Q99626 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX2Q99626 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX2Q99626 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
CDX2Q99626 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms